Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0735 ATGGCTCATTTGGTTTTCTTTGTTTTGCTCTTTGTTGGGCAACTGATTGGTGGATTCAGTATCCAAAAACTGACTCCATCAGACAGTGGAAACGTATTAACTGTTCTGAGTATTGATGGTGGTGGTATCAGAGGGATTATTCCCGCAAAAGTTCTTGATTACCTAGATAAGGCTCTTAAGGCTAAAGATCCAAATGCAGATTTAGCAAATTACTTTGATGTGATAGGAGGGACTGGCACTGGTGGACTCATAACAGCTCTGTTAGCCACCCCAAGCCTTCATGATCCTACTCGTCCTGCCTTTACTCCTGCACAAATTGTAGACTTCTACAAAGAAAACGGCCCTCATGTATTCAATTTATCTAGACTTCACGGTCCCGCATTCGATGGAGAGTTTTTACATAACATAACTCGTGAACTGTTTAAGGATACACGACTTAGTCAAACATTAACCAATGTTGTCATCCCAACTTTCGATATCAAGACACAAAAACCAGTTATATTCTCAAACTATAAGCTTGGGAGGTATCCCTACTTCAATGCCTTGATGTCGGATATAAGCATATCGGCTTCAGCAGCTCCCACTCTTCTACCACCTTACTATTTTGAGAATGATGGTGTTGAGTTCAATTTGATTAGCGGTGCAGACTTGAGTATGTTTAGTATCCTTGATGACAGCTTAGTAAATGGGAATCCGACTAGAGCAACCGTGAGTGAAGCACTTCGACACAATAAGTATTCCAGAATACTTATATTGTCTTTGGGAACTGGAACAAAAGAAACTCAGCAGGATTTGGATGTTGAAATGGCTGCCACATGGACCAATTGGGAATGGCTTATTCATGGAATCACTTTTATTGATCGTGCAACTACTTCCATGGCAGAGTACTATCATGGTTCACTCTTCCAACAACCTCGTATTACCTACCTTCGAATTCAGGAATACGAATTGGATCCTGCTTACTCCAGCTTGGTTGAAGTTGCAAAAGGAAATATGGACGGTCTTGAAGAGACTGGGAAAGAACTTTTAGAAGAAAAAGTTAAGAAGATCAATTTGAACACTTTCTCCGTAGAAGAAGGCGTAGGAACAAATGCTGAGGCTCTTGACAGGCTTGCTGATATTTTGTATGGAGAAAGACAGCATCGTCTGAAGCAAAAGTCTATAGAGAATGGAGGAAGACCATTTCTTCAAACTCTTAGGGTTCCTTCAGACAAAATTCAAGCAAATTGGGCATTTCAAAAGAACAAAGTTCTGTGA 1257 0.4049 MAHLVFFVLLFVGQLIGGFSIQKLTPSDSGNVLTVLSIDGGGIRGIIPAKVLDYLDKALKAKDPNADLANYFDVIGGTGTGGLITALLATPSLHDPTRPAFTPAQIVDFYKENGPHVFNLSRLHGPAFDGEFLHNITRELFKDTRLSQTLTNVVIPTFDIKTQKPVIFSNYKLGRYPYFNALMSDISISASAAPTLLPPYYFENDGVEFNLISGADLSMFSILDDSLVNGNPTRATVSEALRHNKYSRILILSLGTGTKETQQDLDVEMAATWTNWEWLIHGITFIDRATTSMAEYYHGSLFQQPRITYLRIQEYELDPAYSSLVEVAKGNMDGLEETGKELLEEKVKKINLNTFSVEEGVGTNAEALDRLADILYGERQHRLKQKSIENGGRPFLQTLRVPSDKIQANWAFQKNKVL* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0735 418 PANTHER PATATIN 3 393 - -
Vra9g0735 418 SUPERFAMILY FabD/lysophospholipase-like 32 354 IPR016035 -
Vra9g0735 418 Pfam Patatin-like phospholipase 36 214 IPR002641 GO:0006629
Vra9g0735 418 Coils Coil 325 345 - -
Vra9g0735 418 PANTHER XYLOSE ISOMERASE 3 393 - -
Vra9g0735 418 Gene3D Cytosolic phospholipase A2 catalytic domain 22 388 - -
Vra9g0735 418 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 237 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0735 Vra-Chr9 8400977 8403005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0735 24 382 Miscellaneous Gene Families AT2G26560 37.405 2.06e-77 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0735 - - vun:114165690 511.531