Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0731 ATGAAACACACTATGTCTCCATTTCTCTTGTTCTGTTTGGTGTTTCTTAGCCAATTGATGGCTGGATTCAGTTCATCAACACCACCTCCATCATATGGAGATCGTGTATCAATTCTCAGCATTGATGGTGGTGGCATCAGAGGAATTATTCCAGCAACTGTTCTTGATTACTTGGACAAGGCTCTTAAGGCAAAGGATCCGACAACATCATTGGCACATTACTTTGATGTTATATCAGGAACAAGTACTGGTGGACTGATGACTGCAATGTTAGCAGCACCAAATTCATCTAATTCCAATCATCCTCTCTTCACTCCATCAGAAGTAGTGCAGTTCTACAAGAAATATGGCCCTGATATATTTCAAGCTAGAGCTTGGTATGATCTTGAAAAATGTCCCAAGTACGATGGAGAGTTCTTACGGGACATAACACGTCAGATTTTGAATGATACACGACTGAATCAAACGTTGACGAACGTGGTAATACCATCTTTCGATGAGAGGAAACTCTATCCAGTTATATTCTCAAGCTTCAAGTTAAAGACAGAAACTTACTTGAATGCGAAGCTCTCAGATATATGCTTATCCACTTCAGCTGCACCTACTTATCTGCCACCCCACCAATTTGAGAATGATGGTGTTGAATTTGATATGGTTGATGGAGCAATGGCTGCTAATAATCCAGCTTTGGTGGCTGTGAGTGAAGTGATACAACACGCTGGGAACAAAGAAATCATGTTGCTGTCATTAGGAACTGGAATAACAGCAAATAACAACAAGCTAGGTGGCATTTTTGATGGCGTGTGTCAACTTGGATGGCTAGTTAGCAGCTCTGGTGTTTTTAATGAGGCTATGTATAGTACAGACATGACCCATTACTACCTTGCCACAGTGTTCGGTGGCCTCTTACCTCAGGATAACTACATTCGAATTGAGGAGTATAACCTTGATCCATCTATGGAAGATATGGACGATGCTTCACCCGAAAACATGGATAAGCTTGAAAAGGTTGGAAAGAACCTGTTGTCCCAGAGTGTTAGCAGGATAAATATTAATAATTTTGTGCCAGTTCCACTGGACCAAACAAATGCTCAAGCTCTTGACAGGTTGGCTGATAAACTGTATGCTGAGAGGCTGTTGCGTCTGAAAAGGAAATCTATGGAAAAGAGAAGAAGACCATTTATTGGAACTGATGAAGCAAATTCCAATCGAATCTCAGCAGCTTAA 1227 0.4099 MKHTMSPFLLFCLVFLSQLMAGFSSSTPPPSYGDRVSILSIDGGGIRGIIPATVLDYLDKALKAKDPTTSLAHYFDVISGTSTGGLMTAMLAAPNSSNSNHPLFTPSEVVQFYKKYGPDIFQARAWYDLEKCPKYDGEFLRDITRQILNDTRLNQTLTNVVIPSFDERKLYPVIFSSFKLKTETYLNAKLSDICLSTSAAPTYLPPHQFENDGVEFDMVDGAMAANNPALVAVSEVIQHAGNKEIMLLSLGTGITANNNKLGGIFDGVCQLGWLVSSSGVFNEAMYSTDMTHYYLATVFGGLLPQDNYIRIEEYNLDPSMEDMDDASPENMDKLEKVGKNLLSQSVSRININNFVPVPLDQTNAQALDRLADKLYAERLLRLKRKSMEKRRRPFIGTDEANSNRISAA* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0731 408 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 39 233 IPR002641 GO:0006629
Vra9g0731 408 SUPERFAMILY FabD/lysophospholipase-like 36 359 IPR016035 -
Vra9g0731 408 Pfam Patatin-like phospholipase 39 232 IPR002641 GO:0006629
Vra9g0731 408 Gene3D Cytosolic phospholipase A2 catalytic domain 29 387 - -
Vra9g0731 408 PANTHER PATATIN 7 392 - -
Vra9g0731 408 PANTHER XYLOSE ISOMERASE 7 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0731 Vra-Chr9 8365636 8369978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0731 29 389 Miscellaneous Gene Families AT2G26560 41.353 5.66e-84 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0731 - - gmx:100802647 614.379