Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0730 ATGGCTCTTTTGGTTTTCTTTGTTTTGGTGTTTGCTGGGCAACTGATTGGTGGATTCAGTACCCAAAGGTTGCCACCATCAGAAAATGGAAACATTATAACTATTCTGAGCATTGATGGTGGTGGTATCAAGGGAATTCTTCCAGCAACAGTTCTTCATCACTTAGACACGACTCTTAAGACTAAGGATCCAAATGCAGATTTAGCACATTATTTTGATGTGATAGGAGGAACTAGCACTGGTGGAATCATGGCAGCTATGTTAGCCGCCCCAAGTTCTCATGATCCCAATCGTGCTGCCTTTACTCCTGGACAAATTGTAGACTTCTACAAACAAAATGGCCCTCATATATTCAATGCATCTACTGGCACTCTATTCGGTCCCCAATTCGATGGAGAGTTTTTACATTACATAACTCGTAAAGTGTTGAAGAATACACGACTTAGTCAAACATTGACCAATGTTGTCATCCCAAGTTTCGACATCAAGACACAAAAGCCGGTTATATTCTCAAGCTATAAGCTTGGGAATGCTCCGTACTTAAATGCGTTGTTGTCGGATATAGCCTTATCGACTTCAGCTGCACCGATTATTCTACCACCTTACTATTTTGAGAACGAGGGTGTTGAGTTCAATATGATTGATGGTGCTGTAGAAGCTGGGAATCCGACACAAGTAACAATAAGTGAAGTGCTACAACACAATTCATATCCGAAAATCTTGGTGTTGTCTGTGGGAACTGGAGTAGAAAAAGTTACGGAGACCTATACTGCTCAGGAGACTGCCCATTGGCCAGGCGCGTGTTGGGTATTTCCTTTGATTGCTTTCCGTGGTCGTGGTTCTGCAGCCATGGATGAATACCACGTTCAATCATTCTTCAATGGCTCCCAACCTAGTTCCCAACCTAGTTATCAATACCTTCGAATTGAGGAACACGACTTGAATCCTGCTTTCGCCAATCTAGTTAATGTTACACCAGAAAGCATGCAAGGCCTTGAAGACACCGGAAAACAATTGTTACATGAAAATGTTTTAAAGTTGAATTTTGATACTTTTGATCTTTATAAACTTAATCTGAAAAATTACGAGGCTCTTGACAGGATTGCTGATATTTTGGTTGGAGAGAGACAAAGTCGTCTGGAACGGAAATCTATGGAAAAGAGAGGAAGACCACTTCTTGAAAATCTTAGGGTTTTTTCTGAGAAAACTGAAGCAAGTGTGACACTCCTAAAGAACCTTTTTATATAA 1248 0.4079 MALLVFFVLVFAGQLIGGFSTQRLPPSENGNIITILSIDGGGIKGILPATVLHHLDTTLKTKDPNADLAHYFDVIGGTSTGGIMAAMLAAPSSHDPNRAAFTPGQIVDFYKQNGPHIFNASTGTLFGPQFDGEFLHYITRKVLKNTRLSQTLTNVVIPSFDIKTQKPVIFSSYKLGNAPYLNALLSDIALSTSAAPIILPPYYFENEGVEFNMIDGAVEAGNPTQVTISEVLQHNSYPKILVLSVGTGVEKVTETYTAQETAHWPGACWVFPLIAFRGRGSAAMDEYHVQSFFNGSQPSSQPSYQYLRIEEHDLNPAFANLVNVTPESMQGLEDTGKQLLHENVLKLNFDTFDLYKLNLKNYEALDRIADILVGERQSRLERKSMEKRGRPLLENLRVFSEKTEASVTLLKNLFI* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0730 415 PANTHER PATATIN 3 390 - -
Vra9g0730 415 PANTHER XYLOSE ISOMERASE 3 390 - -
Vra9g0730 415 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 228 IPR002641 GO:0006629
Vra9g0730 415 Gene3D Cytosolic phospholipase A2 catalytic domain 22 385 - -
Vra9g0730 415 Pfam Patatin-like phospholipase 36 226 IPR002641 GO:0006629
Vra9g0730 415 SUPERFAMILY FabD/lysophospholipase-like 32 352 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0730 Vra-Chr9 8335068 8337052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0730 24 387 Miscellaneous Gene Families AT2G26560 38.847 1.90e-78 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0730 - - vun:114165690 529.25