Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0728 ATGTCTCCACTGCTTTTGTTTGGTTTGGTGTTTCTGAGCCACTTCAATGGTGGATTGAATACACCATTGCCACCTCCAAACTTTGGAGATCATGTTTCCATTCTAAGCATAGATGGTGGTGGCATCAGAGGAATTATTCCTGCCACTGTTCTTATTTACTTGGACAATGCTCTTAAGGCTAAGGATCCAACGACATCGTTGGCAGATTATTTCGATGTGATATCAGGAACAAGTACTGGTGGAATCATGAGTGTTATGTTAGCAGCTCCAAACGCATCTGATTTCAATCGTCCCCTCTTTACTCCATCACAAGTCGTACAGTTCTACAAGAAAAATGGCCCTAACATATTTAAACCTAGATCTATCATCGATCCCATCCAATGTCCCAAGTATGATGGAAAGTTTTTACGAGATACAGCTCGTCAGATATTGAAAGAAACACGACTCGATCAAACGTTGACCAACTTGGTAATACCAACTTTTGACGAGGACAAAATCCATCCAGTTATATTCTCAAACTACAAGCTGAAGACAGAAAGTTACCTGAATGCGAAACTTTCAGATATTGCTCTTGGCACTTCGGCTGCACCAACTTATTTTCCATCCCACGAATTTCAGAACGATGGTGTTGCATTTGATTTAGCTGATGGTGCTCTCGCTGCTAACAATCCTGCTCTGGTTGCTGTGAGTGAAGTGATACAAAACAATGGGCAAAAGGAAATTTTGTTGCTGTCATTAGGAACTGGAATAACCGCAGCTCAGAATAAGTTAGGTGGCATCTTTGATCTTGGCTGCCAAGCTTTATGGCTAAGTTTACACCAAGATACTTTCAATGAAGCTATGTTCAGAACAGACGTCACTCATTACTATCTTGCCACAATCTTCCCAGGCATCTTACCTGCAGATAACTATCTCCGAATTGAGGAGTATAACCTGGATCCATCCATGGAAGAAATGGATGATGCTTCTAAAAAGAACATGGATAAGCTTGAAACGGTGGGAAAGAACCTGTTGCTCCAAAAAGTTAAGAGGATGAATGTGAATACATTTCTTCCATTTGAACTCGACCAAACAAATGCTCAAGCTCTAGACAGGTTGGCTGAGCGATTATATGCAGAGAGGCAATTGCGTCTGAAAAGAAAATCTATGGAAAAAGGAGGAAGACCTTTCATTGAAACTATATAA 1185 0.4076 MSPLLLFGLVFLSHFNGGLNTPLPPPNFGDHVSILSIDGGGIRGIIPATVLIYLDNALKAKDPTTSLADYFDVISGTSTGGIMSVMLAAPNASDFNRPLFTPSQVVQFYKKNGPNIFKPRSIIDPIQCPKYDGKFLRDTARQILKETRLDQTLTNLVIPTFDEDKIHPVIFSNYKLKTESYLNAKLSDIALGTSAAPTYFPSHEFQNDGVAFDLADGALAANNPALVAVSEVIQNNGQKEILLLSLGTGITAAQNKLGGIFDLGCQALWLSLHQDTFNEAMFRTDVTHYYLATIFPGILPADNYLRIEEYNLDPSMEEMDDASKKNMDKLETVGKNLLLQKVKRMNVNTFLPFELDQTNAQALDRLAERLYAERQLRLKRKSMEKGGRPFIETI* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0728 394 Gene3D Cytosolic phospholipase A2 catalytic domain 26 383 - -
Vra9g0728 394 PANTHER PATATIN 4 385 - -
Vra9g0728 394 Pfam Patatin-like phospholipase 35 228 IPR002641 GO:0006629
Vra9g0728 394 SUPERFAMILY FabD/lysophospholipase-like 31 353 IPR016035 -
Vra9g0728 394 PANTHER XYLOSE ISOMERASE 4 385 - -
Vra9g0728 394 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 229 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0728 Vra-Chr9 8303376 8306151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0728 21 386 Miscellaneous Gene Families AT2G26560 39.000 1.02e-80 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0728 - - vun:114165697 719.924