Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0726 ATGTCTCCATTCCTCTTGTTTTCTTTGGTGTTTTGCAGCCAACTCATGGCTGCATTCAATACACCATTGCCACCTCCAACCTATGGAGATCATGTTTCCATTCTAAGCATAGATGGTGGTGGCATCAGAGGAATTATTCCTGCCACTGTTCTTATTTACTTGGACAATGCTCTTAAGGTTAAGGATGCAACAACATCGTTGGCAGATTATTTCGATGTGATATCAGGAACAAGCACTGGTGGACTCATGACTCTTATGTTAACAGCTCCAAACTCATCTCATCAACCACTCTTTACTCCATCGGAAGTCGTAGAATTCTACAAGAAAAATGGTCCTAAAATATTTCCTAGTCACCTTTTAACAAGTTGTCCGAAGTACGATGGAGATTTCTTAGAACAAAAAACTGTTGAGTTATTGGGAGAAACACGGCTGAGTGATACATTGACGAACGTGGTAATACCAACCTTTGACGAGAAGAAAATCCAACCAGTTATATTCTCAAACTACAAGCTGAAGACAGAAAGTTACTTGAATGCAAAACTCTCAGATATAGGTCTTGGCACTTCGGCTGCACCAACTTATCTTCCAAACCACGTATTTCAGAATGATGGTGTTCAATTTGATTTGATTGATGGTGGTCTGGCCGCTAACAATCCAGCCATGGCTGCTGTGAGTGAAGTGATACAAGAACACAATATGGAAAACAAGATTTTGTTGCTGTCATTAGGAACTGGAATACCAAAACCTAAGGACAAGTTAGGAAACTTCTGGGATGATCTATGCCAAGCTTCCTGGCTAAAGTCACACACAGCAGTTTTTAATGAAGCTATGTTCAGTACAGACATGACTCATTACTACCTTGCCACAATCTTCCCTGCCCTCTCACCTGCAGATAACTATCTTCGAATTGAGGAGTATAACATGGATCCATCCATGAAAGACATGGATGATGCTTCTAAAAAGAACATGGATAACCTTGAAGAGGTGGGAAAGGGTCTGTTGACCCAAAAAGTCAAGAGGATGAATGTGAATACATTTGAACCATTTGAACTAGACCAGACAAATGATCAAGCTCTTAAAGGGTTGGCTGAGAAATTATATGAAGAGAGGCAGCTGCGTCTGAAAAAGAAATCTATGGAGAAAGGAGGAAGACCTTTCATTGAAACTATTTAA 1173 0.4024 MSPFLLFSLVFCSQLMAAFNTPLPPPTYGDHVSILSIDGGGIRGIIPATVLIYLDNALKVKDATTSLADYFDVISGTSTGGLMTLMLTAPNSSHQPLFTPSEVVEFYKKNGPKIFPSHLLTSCPKYDGDFLEQKTVELLGETRLSDTLTNVVIPTFDEKKIQPVIFSNYKLKTESYLNAKLSDIGLGTSAAPTYLPNHVFQNDGVQFDLIDGGLAANNPAMAAVSEVIQEHNMENKILLLSLGTGIPKPKDKLGNFWDDLCQASWLKSHTAVFNEAMFSTDMTHYYLATIFPALSPADNYLRIEEYNMDPSMKDMDDASKKNMDNLEEVGKGLLTQKVKRMNVNTFEPFELDQTNDQALKGLAEKLYEERQLRLKKKSMEKGGRPFIETI* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0726 390 Pfam Patatin-like phospholipase 35 223 IPR002641 GO:0006629
Vra9g0726 390 SUPERFAMILY FabD/lysophospholipase-like 32 347 IPR016035 -
Vra9g0726 390 Gene3D Cytosolic phospholipase A2 catalytic domain 26 379 - -
Vra9g0726 390 PANTHER PATATIN 3 381 - -
Vra9g0726 390 PANTHER XYLOSE ISOMERASE 3 381 - -
Vra9g0726 390 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 224 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0726 Vra-Chr9 8276923 8279957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0726 21 373 Miscellaneous Gene Families AT2G26560 43.367 3.62e-91 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0726 - - vun:114165697 560.066