Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0720 ATGGGGAACGAAGAAGAAGAGGAATTGGTGGCTGAAGTTGAAGCAGTGGAAGCCGTGTATGGAACCGATTGCACCGTTCTCAGTTCATTTCCTCCCCATTTTCACCTCTTTCTCAAACCCAGAACTGCTGATGTTTCCTCCCAACAGTTTGTGGAAGCTGTTCTGGAGATAAAAGCTACCTCACAGTATCCAAAAGAACCACCTTCTATTGAGCTTGTGGATTGCAAGGGTCTGGATGAACAGAGACAGAAACATCTATTAAATTACATACAAAGTAAAGCCTGTGAGATCTCCCCTTGTTTAATGCTTGTAGCTCTTTGTGAGGAAGCTGTTGAGAAACTGTCAGCTATGAATCATCCTGATGGTGATTGTCCATTGTGTTTATTCCCTTTGGTCCCAGAAGATCAGCAAAGCGAAACTTTGCCTTTTATGAAGTTAATGTCTTGTTTTCATTGCTTCCACAGTGAATGTATCATTAGATGGTGGAAATGGCTTCAAAGTTCTAAAGAACCTGACTCTGCCAATACAGACAGTGCAGCTGCACATCGGAACCATGACAATCATAAGAAAATGGAAGAGAGTGTCGGAAACTGCCCTGTCTGTCGCAAACCTTTTCTTGCCAAGGATTTGGACCATGTGCTTGCCCTAGTTGGATCATACTCTTCCCAATCGACTTCAGACAATGAAGAACTCAACGATGAAGATACGCTCCTTCAATCAGAGAATGAGATCATTAGGAGACAAAAATTTGAAGCCATCCTAAATTTACAGAAGGAGAACAGTGGCTTGATTGAACCCAAAAAAGATATACTCATATTACCTGGTATGTATCTTCCACAACCAGTTGCAATGCCGAGCTCCACATCAACCAAGGAATCTGATGAGCAGACACAAAATGAACCACCTGCAGTTGTATCAGCAAAACATGCCGGTGGGACATCCAATGGACCTAGTTCTAGCAGGCAGAAGAATTTCGGTCCAAGGAGGCAGAAAGCAAGAAGTGATAACCACTCTAGTTCAACTGTAAGAAATCCAAGAAAAGCAGTTCAACAGTGGGTAAGAAGAGATACTCCAAGCAATAAGCAATAG 1089 0.4261 MGNEEEEELVAEVEAVEAVYGTDCTVLSSFPPHFHLFLKPRTADVSSQQFVEAVLEIKATSQYPKEPPSIELVDCKGLDEQRQKHLLNYIQSKACEISPCLMLVALCEEAVEKLSAMNHPDGDCPLCLFPLVPEDQQSETLPFMKLMSCFHCFHSECIIRWWKWLQSSKEPDSANTDSAAAHRNHDNHKKMEESVGNCPVCRKPFLAKDLDHVLALVGSYSSQSTSDNEELNDEDTLLQSENEIIRRQKFEAILNLQKENSGLIEPKKDILILPGMYLPQPVAMPSSTSTKESDEQTQNEPPAVVSAKHAGGTSNGPSSSRQKNFGPRRQKARSDNHSSSTVRNPRKAVQQWVRRDTPSNKQ* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0720 362 SUPERFAMILY RING/U-box 116 208 - -
Vra9g0720 362 MobiDBLite consensus disorder prediction 311 325 - -
Vra9g0720 362 MobiDBLite consensus disorder prediction 337 362 - -
Vra9g0720 362 SUPERFAMILY UBC-like 5 114 IPR016135 -
Vra9g0720 362 Pfam RWD domain 8 113 IPR006575 GO:0005515
Vra9g0720 362 MobiDBLite consensus disorder prediction 282 303 - -
Vra9g0720 362 MobiDBLite consensus disorder prediction 282 362 - -
Vra9g0720 362 Gene3D Ubiquitin Conjugating Enzyme 2 119 IPR016135 -
Vra9g0720 362 ProSiteProfiles RWD domain profile. 11 117 IPR006575 GO:0005515
Vra9g0720 362 SMART RWD2001b 11 117 IPR006575 GO:0005515
Vra9g0720 362 ProSiteProfiles Zinc finger RING-type profile. 124 202 IPR001841 -
Vra9g0720 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 216 IPR013083 -
Vra9g0720 362 SMART ring_2 124 201 IPR001841 -
Vra9g0720 362 PANTHER RING FINGER PROTEIN 25 4 345 IPR039133 GO:0061630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0720 K10640 - gmx:100791789 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0720 9 8191732 8197886 Vra9g0720 9 8191732 8197886 ECH