Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0687 ATGGAGGTCAAAACTCACATAGCAATAGTTTCAGTTCCAGTATACAGTCATCTACGTTCAATTCTTGAGTTCTCTAAGAGACTGGTTCATCTCCACCATGATATTCATGTCACATGCATTAACCCTACATTCGGTTCACCCTGCAACAACACCAAAGCCCTTTTTGATTCTCTTCCCTTAACCCTAAACCAGATGTTCCTTCCACCAGTTAACTTGGAGGATCTTCCACATGACACTCACCCTGCAATCCAAGTTCAGGTCACAATCTCTCGTTCTCTACCTCTGATCTATGATGCATTGAAGGCACTGCATGCTACTTCAAGCCTTGTTGCAATCATTTCTGATGGTTTGATAACACAAGTGTTACCCTTTGGCAAAGAACTCAATGTGTTGTCCTACTCATATTTTCCATCCACAGCAATGTTATTATCACTTTGTTTGTATTCTTCTATGCTTGACAAGGCAATATCTTGTGAGTACAGAGACCTTGTAGAACCTATAGAGATTCCTGGCTGCATACCGATTCATGGAACTGATCTTCCCGACCCTCTTCAGAATCGATCAGGTGCAGCATATAAACAATTTCTTGAAGGCAATGAAAGATTCTACTTAGCTGATGGTATATTGGTTAACAACTTTTTGGAGATGGAAGAAGGGATCATAAGGGCCTTGCAAGAAGAACAGGAGAAAGGAAGAATCCCTTGTGTTTATGCAGTAGGACCCTTTGTGCAAGAGGAGCAATGCAGAGAGGGAAGCAGCAATGACATAAAATATTTGAGATGGTTGGACAAACAACCATGCAATTCTGTGTTATATGTTTCCTTTGGAAGTGGTGGAACACTGTCTCATGAACAGATAAAAGAGCTTGCTTGGGGATTGGAACTGAGTGGCCAAAAGTTCTTGTGGGTGTTAAGACCACCTAACAAGTTTGGCATTATTGCAGACATTGGAGCCAGAAATGAGGACCCTTTTGAGTTTCTACCAGATGGGTTTGTGAAGAGAACAGAAGGGCATGGGTTGGTGGTGCCATATTGGGCTTCACAGGTTGAAATCCTTGGTCATGGTGCAATTGGGGGATTCCTATCTCATTGTGGTTGGAACTCAACACTTGAAGGTGTTGTGCATGGGATTCCACTGATTGCATGGCCACTCTTTGCTGAGCAAAAGATGAATGCAGTTCTGCTGAGTGATGATTTGAAAGTGGCTCTTAGGGTTAGGGTTAGTGAGAATGGGATTGTGGAAAGGGAAGAGATAAGTAGGATCATAAGGAAGCTGATGGTGGGAGAAGAAGGCAAGGAAATTATTCAAAGAATGAAAGTTTTGAAAGATGCTGCTGTTGATGCTATCAAGAATGAAGGATCTTCAACAGTAACCCTAACTCAGTTGGCACTAAAGTGGAAAAGTTTGAGTTTGGAATGCTGCTGTTAA 1428 0.4209 MEVKTHIAIVSVPVYSHLRSILEFSKRLVHLHHDIHVTCINPTFGSPCNNTKALFDSLPLTLNQMFLPPVNLEDLPHDTHPAIQVQVTISRSLPLIYDALKALHATSSLVAIISDGLITQVLPFGKELNVLSYSYFPSTAMLLSLCLYSSMLDKAISCEYRDLVEPIEIPGCIPIHGTDLPDPLQNRSGAAYKQFLEGNERFYLADGILVNNFLEMEEGIIRALQEEQEKGRIPCVYAVGPFVQEEQCREGSSNDIKYLRWLDKQPCNSVLYVSFGSGGTLSHEQIKELAWGLELSGQKFLWVLRPPNKFGIIADIGARNEDPFEFLPDGFVKRTEGHGLVVPYWASQVEILGHGAIGGFLSHCGWNSTLEGVVHGIPLIAWPLFAEQKMNAVLLSDDLKVALRVRVSENGIVEREEISRIIRKLMVGEEGKEIIQRMKVLKDAAVDAIKNEGSSTVTLTQLALKWKSLSLECCC* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0687 475 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 464 - -
Vra9g0687 475 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 462 - -
Vra9g0687 475 CDD GT1_Gtf-like 6 445 IPR002213 GO:0008194
Vra9g0687 475 ProSitePatterns UDP-glycosyltransferases signature. 345 388 IPR035595 -
Vra9g0687 475 Gene3D Glycogen Phosphorylase B; 6 455 - -
Vra9g0687 475 PANTHER TRANSFERASE, PUTATIVE-RELATED 1 464 - -
Vra9g0687 475 Gene3D Glycogen Phosphorylase B; 253 450 - -
Vra9g0687 475 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 267 397 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0687 Vra-Chr9 7858668 7860960 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0687 6 468 Glycosyltransferase AT1G01420 43.441 7.53e-136 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0687 K08237 - gmx:100819727 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0687 9 7858668 7860960 Vra9g0687 9 7858668 7860960 ECH