Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0685 ATGGAGTCATCACCAATAACAACAACCCACATAGCCCTTGTCTCGGTCCCTGCTTTCAGCCACCAAGTCTCGATCCTCGAGTTCGCAAAACGACTCCTCCATCTCCACGCTGACACCTTCCACGTTACATGCATCATTCCCACACTCTCTTCTTCACCTTCAAAGCACTCCTTCTTCTTCGATTCCCTCCCTCACAACATTCACTGCATCTTCCTCCCCTCGGTCAACTTCCATGACCTAAACAACAATGGCGTCTCCGTCGAAATCCAGACTCAGCTCTCGGCCTCTCGAGCCATGTCCTCCGTCAGAGAAACCCTAGTTTCACTCTCCAAAACCACTGATATCTCTGCTCTCGTTGCCGATGCCATGGCCCCGGAGGCTCTGGAGTTTGGTAAGGAACTCAACATCTTGTCCTACATATACTTCCCTTGCTCCACCATGGTGCTGTCCGTTTGCTTTCATTCTCAAAACCTCGACGAAGAGGTTTCGTGTGAATACAAGGATCACCCTGGTTTGATACACCTTCCTGGTTGTATCCCTATCTCTGGCAGAGATCTTCCTGACAGCATGCAAGATAGAGGAAGTTTGGCATACAAGCTTTTCCTTCAACGATGCCAAAGATACCTTAATGGTCATGATGGTATATTGGTGAACAGCTTCATGGAATTGGAAGAAGAAGCAACAAAAGCAATATCCCAACATGGTAATGGTGGTGATTACCCTCATGTGTATTCAGTTGGCCCCATCACACAAAGTGGTCCTAGTGGTTCAAAAAGTAGGTGTGAGTGTTTATTGTGGTTGGATAAACAAGAACCTAATTCAGTTCTTTACGTGTCTTTTGGGAGTGGTGGCACACTTTCCCAAGATCAGATCGATGAACTTGCATTAGGGTTGGAGCTGAGTAAGCAGAAGTTTCTGTGGGTGAATCTGAGAGCACCAAATGATAGAGCAAGTGCTACTTATTTCAGTGAGGGGGGTTTGGTGGATGATGATGATCCTTTGCATTTTTTGCCAAAGGGGTTCCTAGAGAGAACGAAGGAGCAGGGTTTGGTGATGTGTGGGTGGGCCCCACAAGTGGAAGTGCTTGGACACAGGTCGATTGGTGCATTTTTGAGTCATTGTGGTTGGAACTCAGTTTTGGAGAGTGTTGTGCATGGAGTGCCAATGATAGCATGGCCTTTGTTTGCTGAACAGAGAAGCAATGCAGCTTTGGTGAGTGATGGATTGAAAGTTGCTTTGAGGGCAAAGATGAAGAAGCCTAGTGTGGTGGTGAAGGAGGACATTGTTAAGCTCATAAAAGGTTTGATGGAGGGTTTGGAGGGTCAAGAAATCCGTAGGAAAGTCAAGGAACTCAAGAAGCTTGCTAACTCTGCAATCATGGAAGATGGCTCCTCCACAAGGACTATAGCAAATTTGGCAAACAAGTGGAAGAATAAACACACCTGA 1446 0.4661 MESSPITTTHIALVSVPAFSHQVSILEFAKRLLHLHADTFHVTCIIPTLSSSPSKHSFFFDSLPHNIHCIFLPSVNFHDLNNNGVSVEIQTQLSASRAMSSVRETLVSLSKTTDISALVADAMAPEALEFGKELNILSYIYFPCSTMVLSVCFHSQNLDEEVSCEYKDHPGLIHLPGCIPISGRDLPDSMQDRGSLAYKLFLQRCQRYLNGHDGILVNSFMELEEEATKAISQHGNGGDYPHVYSVGPITQSGPSGSKSRCECLLWLDKQEPNSVLYVSFGSGGTLSQDQIDELALGLELSKQKFLWVNLRAPNDRASATYFSEGGLVDDDDPLHFLPKGFLERTKEQGLVMCGWAPQVEVLGHRSIGAFLSHCGWNSVLESVVHGVPMIAWPLFAEQRSNAALVSDGLKVALRAKMKKPSVVVKEDIVKLIKGLMEGLEGQEIRRKVKELKKLANSAIMEDGSSTRTIANLANKWKNKHT* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0685 481 Gene3D Glycogen Phosphorylase B; 257 460 - -
Vra9g0685 481 Gene3D Glycogen Phosphorylase B; 10 465 - -
Vra9g0685 481 ProSitePatterns UDP-glycosyltransferases signature. 355 398 IPR035595 -
Vra9g0685 481 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 7 479 - -
Vra9g0685 481 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 478 - -
Vra9g0685 481 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 272 406 IPR002213 GO:0008194
Vra9g0685 481 CDD GT1_Gtf-like 10 466 IPR002213 GO:0008194
Vra9g0685 481 PANTHER GLYCOSYLTRANSFERASE 7 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0685 Vra-Chr9 7825525 7827248 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0685 7 477 Glycosyltransferase AT1G01420 42.616 8.36e-129 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0685 K08237 - gmx:100775351 732.25