Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0679 ATGATGCAGAGGTTCTTCACAAAGGCAAAGCTTAGCCTTAATACATACCGAAGCTTCTCTTCTTCTCAACACGTCATTCTCGACAACCCCAATCACAGTCAGGTTTTGGTCGAAGGAAATGGATGCTCCAGAATGGCCATTCTCAATAGACCCTCTGCTCTCAATGCTCTCAACACCAACATGCTGGCCACGCTGCATAAATTTTATAGGAGCTGGGAAGATAACCCTGATATTGGATTTGTGATGATGAAGGGCAGTGGCCGAGCTTTTGCAGCTGGTGGAGATATTGTTGCGCTTTACCATTTTATAAACAAAGGAAACATGGAAGCGTGTAAAGAATTTTTCAGAACAGCCTATAGTTTTATGTACCTGATAGGTACATATTTGAAGCCACATGTGGCACTTCTAAATGGCATTACCATGGGTGGTGGGGCTGGGGTTTCAATCCCTGGGACATTCCGTGTTGCAACAGACAAAACTATTTTTGCTACCCCTGAAGTTCATATTGGATTCCACCCGGATGCTGCAGCATCTTTTTACCTTTCACATTTACCTGGTCATTTAGGAGAGTACTTGGCTCTGACAGGAGAAAAGCTGAACGGAGTAGAGATGGTTACTTGCGGGCTTGCTACACACTATTCATTAAGTGCAAGGCTTCCTTTAATTGAAGAACAGCTGGGGAAATTAGTTACTGATGACCCATCTGTCATTGAAGCCACTTTAGAACACTATGGGGACCTTGTACATCCAGACAGCAGTAGCGTACTACAAAGGATTGAAATTCTAGATAAATGCTTTTGCCATGACTCGGTTGAAGAGATTGTTGATGCTATGGAAAATGCAGCAAGTGAAACAAAAGATGCTTGGTGTATTTCTACCCTAAATAGACTCAAAGAAGCCTCTCCATTGAGCTTGAAGGTTGCCTTGAGATCTATAAGAGAAGGTACATTTCAGACTCTTGATCAATGTTTGCTGCGTGAGTACCGTATGACTTTACAAGCAATACATGGGAAAATATCTGGAGATTTCTGTGAGGGAGTAAGGGCACGCGTGGTGGACAAGGACTTTGCACCAAAGTGGGATCCTCCAACCTTAGAAAAGGTGTCTCAAGACATGGTGGATCAGTACTTCTTACCTTTGAGTGATTCTGAACCTGATCTAGAGCTGCCCACAAAAAGTCGTGAAGCATTTCTATAG 1197 0.4319 MMQRFFTKAKLSLNTYRSFSSSQHVILDNPNHSQVLVEGNGCSRMAILNRPSALNALNTNMLATLHKFYRSWEDNPDIGFVMMKGSGRAFAAGGDIVALYHFINKGNMEACKEFFRTAYSFMYLIGTYLKPHVALLNGITMGGGAGVSIPGTFRVATDKTIFATPEVHIGFHPDAAASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLATHYSLSARLPLIEEQLGKLVTDDPSVIEATLEHYGDLVHPDSSSVLQRIEILDKCFCHDSVEEIVDAMENAASETKDAWCISTLNRLKEASPLSLKVALRSIREGTFQTLDQCLLREYRMTLQAIHGKISGDFCEGVRARVVDKDFAPKWDPPTLEKVSQDMVDQYFLPLSDSEPDLELPTKSREAFL* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0679 398 CDD crotonase-like 35 212 - -
Vra9g0679 398 Pfam Enoyl-CoA hydratase/isomerase 44 377 IPR045004 -
Vra9g0679 398 SUPERFAMILY ClpP/crotonase 33 363 IPR029045 -
Vra9g0679 398 Gene3D - 29 393 - -
Vra9g0679 398 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 22 397 IPR032259 GO:0003860
Vra9g0679 398 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL 22 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0679 Vra-Chr9 7738007 7746136 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0679 30 398 Acyl Lipid Metabolism Gene Families AT4G31810 63.158 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0679 K05605 - gmx:100801676 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0679 9 7738007 7746136 Vra9g0679 9 7738007 7746136 ECH