Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra9g0630 | ATGGGAAGTGAGAAAGCAGAAAGTTCGTGCGCGTCGCCATGGCTGAAAATCTCGAAGGAAGTTGACCCTGCAGTTGCCTCTGCGGCCTTGCGCTTCGTTGATCGCATGGGAGCTTCCACCGCCATTCCCCCTAAGTGGGAGGCGCGTGGCTCCTACGACCCCTTCTTTCGGAACTTCTTCAAAATCCTTCACATCCAACCAGGACGAATTTCGATCTCCGTTCACGTCAAACCTCCCATCTGTAATACCTTTGGAACTCTGCATGGGGGTTCTGTTGGGACTTTGACTGAGATTCTGTCAACTGCTTGTGCTAGAACGGTAGTTCCTGAGGATAAAGAACTTTTTCTTGGGGAAATTAGCATTTCTTACATGTCTGCCACTCCAGCAAATGAAGAAGTGTTAGCAAATGCCTCCGTAGTGAAGTCCGGCAGAAATTTGACTGTAGTCGCAGTTGAGTTCAAATTGAAGAAATCTGGGAATATGGCATATAGCACTCGTGCTACCTTCTATAACATGCCTCTTTCCAGTTTATGA | 534 | 0.4775 | MGSEKAESSCASPWLKISKEVDPAVASAALRFVDRMGASTAIPPKWEARGSYDPFFRNFFKILHIQPGRISISVHVKPPICNTFGTLHGGSVGTLTEILSTACARTVVPEDKELFLGEISISYMSATPANEEVLANASVVKSGRNLTVVAVEFKLKKSGNMAYSTRATFYNMPLSSL* | 178 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra9g0630 | 177 | SUPERFAMILY | Thioesterase/thiol ester dehydrase-isomerase | 60 | 174 | IPR029069 | - | |
| Vra9g0630 | 177 | CDD | PaaI_thioesterase | 60 | 170 | - | - | |
| Vra9g0630 | 177 | PANTHER | OS07G0462700 PROTEIN | 12 | 177 | - | - | |
| Vra9g0630 | 177 | Pfam | Thioesterase superfamily | 84 | 158 | IPR006683 | - | |
| Vra9g0630 | 177 | PANTHER | THIOESTERASE SUPERFAMILY MEMBER-RELATED | 12 | 177 | IPR039298 | GO:0047617 | |
| Vra9g0630 | 177 | Gene3D | Hotdog Thioesterase | 44 | 173 | - | - | |
| Vra9g0630 | 177 | TIGRFAM | unchar_dom_1: uncharacterized domain 1 | 61 | 165 | IPR003736 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra9g0630 | Vra-Chr9 | 7247662 | 7251059 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra9g0630 | K17362 | - | gmx:100499764 | 253.447 |
Event-related genes