Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0621 ATGGGGGAAGCTACACATAGGTATGCAGTAGTGACAGGAGAAAATAAAGGGATTGGATTAGAGATAGTTAGGCAGTTAGCTTCAGAAGGAATAAAGGTGGTACTCACTGCAAGGAATGAAGAGAGAGGTCTTCAAGCCTTGGAAACACTCAAAGCCTCTGCTCTTTCTCATCTACTCTTCTTTCATCAGCTAGATGTGGCTCATCCTGCAAGTGTAGCTGCTTTTACACATTTTATCAAATCCAAATTTGGTAAACTTGATATTCTGGTTAACAATGCGGGAATCAGTGGAATTGTAATTGAAGACAGAGACTTATTCACTACATTAATCGTGAATAATGGGGTGATATCAGATGAGGAAGGAACAAGGGCAGTAACTCAAACATATGAGTTAGCAGAAGAATGCTTGAAAATAAATTACTATGGCGCTAAAATAACTATTGAATTCCTTATGCCCCTCTTGCAATTATCTGACTCGCCAAGAATTGTGAATGTATCATCCACAAAGGGGCAGTTAAAGAGTTTCTCTAAAGAATCATGGGCAAGAGGAGTGTTCAGCGATGTTGATAACCTGACAGAAGAGAAAATGGATGAAATAGTGAAGAAATTTCTAATTGATTTCAAAGAAGGTAGATTAGAGAGTAAAGGGTGGCCAAAGTATCTAGGTGCCTATATTGTATCGAAAGCTGCTATGAATGGGTACACGAGAATC 711 0.3882 MGEATHRYAVVTGENKGIGLEIVRQLASEGIKVVLTARNEERGLQALETLKASALSHLLFFHQLDVAHPASVAAFTHFIKSKFGKLDILVNNAGISGIVIEDRDLFTTLIVNNGVISDEEGTRAVTQTYELAEECLKINYYGAKITIEFLMPLLQLSDSPRIVNVSSTKGQLKSFSKESWARGVFSDVDNLTEEKMDEIVKKFLIDFKEGRLESKGWPKYLGAYIVSKAAMNGYTRI 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0621 237 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Vra9g0621 237 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 IPR002347 -
Vra9g0621 237 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 224 237 IPR002347 -
Vra9g0621 237 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 237 - -
Vra9g0621 237 Pfam short chain dehydrogenase 8 175 IPR002347 -
Vra9g0621 237 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 7 237 - -
Vra9g0621 237 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 236 IPR036291 -
Vra9g0621 237 Gene3D - 3 237 - -
Vra9g0621 237 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Vra9g0621 237 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Vra9g0621 237 PRINTS Glucose/ribitol dehydrogenase family signature 224 237 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0621 Vra-Chr9 7138334 7140562 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0621 3 170 Acyl Lipid Metabolism Gene Families AT1G63380 29.310 1.17e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0621 K15095 - gmx:100801677 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0621 9 7138334 7140562 Vra9g0621 9 7138334 7140562 ECH