Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0608 ATGGACAAGGACAACGAGACATATCTGAAACTGTTCTTGGGGCGTTCGAATCATCACAGACAGAGTTTGCTGTCAAAGAAGGGAAAATCCAGAGCAATGGTGTTTGTCATGGTTTGCTTTGCAGCCACTTTCCTTGCTTTCACTGTCTGGAACATTAGCTCGACGTTTTCTGGAGGTGCTTCCATTCTAATGAAGAAGAAAGTCTCCCCCGTGCCAATACCGGAAGCCCAAGAAGAGTTCCCACTTAGGTGCACCCAACCACACGTGCCAGAAAAGTGCCCTAGAGACTACCCTACTTCACATAAGCCCACGGGCCCGGCCCGGACGTGCCCTTCGTACTTCAAATGGATCCATGAGGACCTGAAGGCATGGAAAGAGAGAGGGATAACGAGGGAGATGGTGGAAGGGGCAAGGAGAACAGCACACTTCAGGGTAGTGATCGTGGACGGGAGGGTGTACGTGGAGAAGTATAAGAAGTCGATCCAGACCAGAGATGTGTTCACTTTGTGGGGCATCATGCAACTGCTGAGGAGGTATCCCGGTAAAGTTCCTGATTTGGAGCTGCTATTTGATTGTGATGATAGGCCCGTTATACCCAAGGGAAGGTTTCAAGGCCCAAATGCTGCTACTCCACCGTTGTTTCGCTATTGCTCTGACCAGTGGAGCTTTGATATTGTCTTCCCTGATTGGTCCTTTTGGGGATGGGCTGAAATAAACATAAAGCCATGGAAATATGTGCTGGAAGATATTAAAAATGGGAACAAGAAGACAAAGTGGAAAGAAAGAGTGCCGTATGCCTATTGGAAGGGTAACCCTTATGTCACTCCAACTAGGAAAAACCTTATGAAATGCAATCTCACAGAGAAAGATGACTGGAACACTCGTTTATACATACAGGACTGGGAACAAGAATCCCATCAAGGGTTCAAGCAATCCAACTTAGGGGACCAATGCACACATAGGTACAAAATATATGTAGAAGGTTGGGCTTGGTCTGTGAGTGAAAAGTACATTTTGGCATGCGATTCTACAAACTTATATGTTAGGTCTCGGTTCCATGATTTTTTTATCCGAGGCATGGTGCCATTAGAGCACTACTGGCCCATTAGAGACAATAGCAAGTGCACTTCTCTTAAGTTTGCTGTGGAATGGGGCAACAACCACACTGACAAGGCAGAAGCAATAGGAGAGGCTGCAAGCAAATTCATTCATGAGGACATGGACATGGACCATGTGTATGATTACATGTTTCACCTACTAAATGAATATGCAAAGCTCCTTAGGTTCAAACCAGTTATACCTCCAAAAGCTGTGGAGTATTGTCCTGAAACAATGGCATGTGCTTTAAATGGTACAGAGAGAAGGTTCATGGAAGATTCAATGGTGAAGTTTCCTAGTGATTCAAATCCATGCACTATTCCTCCTCCATATGATGCCACAAGCCTACAACAATTTCTAGACAGAAAAGCTAATTCAATAAGACAGGTAGAAATTTGGGAAGATGAATATTGGGAGAGTAAAAAGAAGGTACAATAG 1536 0.4473 MDKDNETYLKLFLGRSNHHRQSLLSKKGKSRAMVFVMVCFAATFLAFTVWNISSTFSGGASILMKKKVSPVPIPEAQEEFPLRCTQPHVPEKCPRDYPTSHKPTGPARTCPSYFKWIHEDLKAWKERGITREMVEGARRTAHFRVVIVDGRVYVEKYKKSIQTRDVFTLWGIMQLLRRYPGKVPDLELLFDCDDRPVIPKGRFQGPNAATPPLFRYCSDQWSFDIVFPDWSFWGWAEINIKPWKYVLEDIKNGNKKTKWKERVPYAYWKGNPYVTPTRKNLMKCNLTEKDDWNTRLYIQDWEQESHQGFKQSNLGDQCTHRYKIYVEGWAWSVSEKYILACDSTNLYVRSRFHDFFIRGMVPLEHYWPIRDNSKCTSLKFAVEWGNNHTDKAEAIGEAASKFIHEDMDMDHVYDYMFHLLNEYAKLLRFKPVIPPKAVEYCPETMACALNGTERRFMEDSMVKFPSDSNPCTIPPPYDATSLQQFLDRKANSIRQVEIWEDEYWESKKKVQ* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0608 511 SMART cap10 182 430 IPR006598 -
Vra9g0608 511 Pfam Glycosyl transferase family 90 107 500 IPR006598 -
Vra9g0608 511 PANTHER GLYCOSYLTRANSFERASE 26 507 - -
Vra9g0608 511 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 26 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0608 Vra-Chr9 6909469 6914795 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0608 - - gmx:100790123 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0608 9 6909469 6914795 Vra9g0608 9 6909469 6914795 ECH