Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0601 ATGATCAAATGGATTTTCGTCTCCATCATCGTCTTGGTTCTTTTTGTTGCAAGCTCTTTTATCCTCGAAATCGATCTTTCCAGAATAGGAGGAAGTACTCTTAGGAGAATTATTATATTCAATAACCAACCAAATGAATTCTCAATCAGTTGCTCTGATGGGAACTCAACAGAAACATGTTCATCGTACTATCCAACAAACATTGAGTTTGAAGATGATTCACCAACAACATCATGTCCAGAATACTTTAGATGGATTCATGAAGATCTAAAACCATGGAAGAATACAGGAATCACAAGGGAAATGGTTGAAAGAGGCAAAAACATTTCACATATTAGGCTTGTAATTGTAAATGGAAAAGCTTACATAGAAAAACATGGCAAAGTGTTTCAAACAAGAGATATGTTTACAATATGGGGAATTTTGCAACTCCTAAGGTTGTATCCAGGAAAAATACCAGATTTGGAGATAATGTTTCAATGTGGAGACAAAACTGTGGTGAGCAAAAAAGATTTCCAGGAACCACAAATTTCACCTCCACCTGTGTTCCATTACTGTGGAAATGAACATTCATATGATATTGTCTTTCCTGATTGGACCTTCTGGGGCTGGGCTGAGCTTAACATAAGACCATGGGAAACAACATTACATAATATACAAGAAGGCAACAAAATAGTGAAATGGAAGGATAGGATACCCTATGCTTTTTGGAAGGGCAACCCCAAAGTGTCCTATGTCAGGGGAGAGCTAGGCAAGTGCAATGCCACAGAAAACCATGATTGGAATGCAAGAATATATGGCATACAATGGCAGAACGAGAAAGCAAACCATTTCGAGAACGCAAAACTAGAAAATCAATGTACATTTAGATACAAGATCTACACAGAAGGGGCTACATGGTCTGTGAGTGAAAAGTACATAATAGCATGTGACTCGATGACCATGTTCATAGAACCTAAGTATTATGACTTCTTTACAAGAAACATGTTACCTTTACAACACTATTGGCCTATCAGCATCAGAAACATGTGTGAAGAGATTAAGTATGCAGTGGATTGGGGAAATTCTCACCTTCACATTGCAGAGGCGATTGGTCAGAGAGGAACTAAGTACGTTGTAGAGAATTTAAAGATGAAATTTGTGTATGATTACATGTTTCATCTACTAAATGAGTATGCAAAGCTCATGAAATTCAAACCAATTATACCTACAGAAGCTGTTGAAACTTGTGCTGAAAGTATGGTTTGCTCTGTGCGTGGTTTAAAGAAACGTCTTTTTGTTGAGTCCATTGTAACTTCACCAAGTGAGACACCTCCATGTACAATACCTCCGCCTTATACACCACAAACTTTGAAAGAGTTTCTGCAACATAAGCAAAATCTGTTGAATCAAGTGAAGACAAGGACGATAAATATAAAGGAATGA 1425 0.3733 MIKWIFVSIIVLVLFVASSFILEIDLSRIGGSTLRRIIIFNNQPNEFSISCSDGNSTETCSSYYPTNIEFEDDSPTTSCPEYFRWIHEDLKPWKNTGITREMVERGKNISHIRLVIVNGKAYIEKHGKVFQTRDMFTIWGILQLLRLYPGKIPDLEIMFQCGDKTVVSKKDFQEPQISPPPVFHYCGNEHSYDIVFPDWTFWGWAELNIRPWETTLHNIQEGNKIVKWKDRIPYAFWKGNPKVSYVRGELGKCNATENHDWNARIYGIQWQNEKANHFENAKLENQCTFRYKIYTEGATWSVSEKYIIACDSMTMFIEPKYYDFFTRNMLPLQHYWPISIRNMCEEIKYAVDWGNSHLHIAEAIGQRGTKYVVENLKMKFVYDYMFHLLNEYAKLMKFKPIIPTEAVETCAESMVCSVRGLKKRLFVESIVTSPSETPPCTIPPPYTPQTLKEFLQHKQNLLNQVKTRTINIKE* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0601 474 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 3 473 - -
Vra9g0601 474 SMART cap10 151 399 IPR006598 -
Vra9g0601 474 Pfam Glycosyl transferase family 90 76 467 IPR006598 -
Vra9g0601 474 PANTHER GLYCOSYLTRANSFERASE FAMILY 90 PROTEIN 3 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0601 Vra-Chr9 6825748 6828811 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0601 - - gmx:100787989 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0601 9 6825748 6828811 Vra9g0601 9 6825748 6828811 ECH