Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0594 ATGATTGCACAGTTGACAGGAATTATGAAGAATGAGGGAAAATCAGGAGAGGATAGAATTAGCCAGTTATCAGATGATGTACTGTGTCACATCCTTTTGTTCCTTACCACCGAGGAAGCCGTAGCTACATCCTTGTTGTCTACCAGGTGGAGATTTCTATGGAGAATGCTTCCATTTCTTGACATTCACTGCTCCAAACCAATCATAAAATCCCACAAGAGTGTTAATACATTCTTGGCACTACGCATAACACAAAACATCACAAGGTTTCATCTCAAATGTAATAGCCATAGTTGTTGCTCACATTATGTGGAACAATGGGTCTGTGCAGTGAAAGCAAGAAAAGTTGAACATGTGGATATCTCCTTATGCATGTGTCACAGAAGCGTGATCAACTTCGCCACCTTGTTCACCTGTGCCACACTTGTCACTTTGAAGCTCGAGGGTCTCTTTAATCTCTCTATTCCTTCTGGTGTTCATCTTCCTAAACTCAAAAGTTTGCACCTTCACATACATGCATTCACCTCCTTCTCCAGCATCAGGAACCTTATCTCTGGATCTCCAGCTCTTGAACTGTTCCACCTGAGGCAGAACTGGTACTTGTCACATTTCAACGAGTTGAAGATTGTGCGAAACTCTCGAGTTATCCAACTGTTCCAACGCAAATGGTTTTACAACCTTGTTATACAAAGTGATCGTTATTATGATTTTGTCCCAGACTACTTGGATAGTTGTAGTAGGTCAAACATTGTTAAAGCCAAAGTTTATATGACAGTGTTTGGTGGAATCAAGGATTTTTATGCTAACCAGTTTGTTTGTGAGACTCTGAAAGAATTATGTAACGTTGAGTTTCTGTCTTTGGGTGATTTTAGGTTAGAGAAATACCCTTTTAGTCTTGATCTTCTACTGTTGAAGAATCTTGTTGAGCTAAGATTGTCTCTTGAAAATAGGGACTCCATGTATATGGAACTTCCTGGGAAGTGTCCTAAGCTTGAAGTTCTTGAAGTTAATATCATGGATGATGGCTGTGGTGCTAATCAAAGGTGTAAATATCGTATTAGTGGCGGAGTGAGGGAACACGACTTGTCTATTGTTCCTTTTTCACCAGAGACAACATTGCTGCAAAGTTGA 1131 0.4014 MIAQLTGIMKNEGKSGEDRISQLSDDVLCHILLFLTTEEAVATSLLSTRWRFLWRMLPFLDIHCSKPIIKSHKSVNTFLALRITQNITRFHLKCNSHSCCSHYVEQWVCAVKARKVEHVDISLCMCHRSVINFATLFTCATLVTLKLEGLFNLSIPSGVHLPKLKSLHLHIHAFTSFSSIRNLISGSPALELFHLRQNWYLSHFNELKIVRNSRVIQLFQRKWFYNLVIQSDRYYDFVPDYLDSCSRSNIVKAKVYMTVFGGIKDFYANQFVCETLKELCNVEFLSLGDFRLEKYPFSLDLLLLKNLVELRLSLENRDSMYMELPGKCPKLEVLEVNIMDDGCGANQRCKYRISGGVREHDLSIVPFSPETTLLQS* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0594 376 Pfam F-box domain 20 58 IPR001810 GO:0005515
Vra9g0594 376 SUPERFAMILY F-box domain 16 95 IPR036047 GO:0005515
Vra9g0594 376 Gene3D Ribonuclease Inhibitor 60 340 IPR032675 -
Vra9g0594 376 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 18 337 - -
Vra9g0594 376 SMART fbox_2 23 63 IPR001810 GO:0005515
Vra9g0594 376 SUPERFAMILY RNI-like 97 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0594 Vra-Chr9 6712789 6714413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0594 13 191 EF-hand Containing Proteins AT5G41840 33.663 1.31e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0594 - - gmx:102659597 428.713