Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0590 ATGTACCACCAACCCAGAACCCAACAACTCAAACCCACAACCTTCTTCTCTTCTCTCTTCTGCCCAAAATGCCCTCTCAACCACAACCTCCTTCTTCTCCTTCCCAAGCCCAACAAAAAGCCCACCATCTCCGCCTCTCTGCCTACCGGGCCCGCCTCCGGGCCCGACCAGGCCCTAATCTCCCTCCTCCGCTCCATCCCGGACTGGGCCGACACGGTGCAGGAGCGCGGCATGCAGAAGAAGCGCTCCCTCTACACCCACTTGAACTGGCGCGACCACCGCAGCTCCATCCGCCACCTCCGTCACCTCCTCTCCAGCCTCTCCTCCCGCGTCATCCTCTCCCTCGTACCCCCTGTCCTCTTCTTCACCGGCTTCGCCGCCGCCATCGCCTCCTACAACCAAGCCCTAATCCTCCATATCCTCCCCGACTTCCTCCCCCTCCTCCACTCCTCCTCCCTCCCCTACCAGCTCACCGCCCCCGCCCTCGCCCTCCTCCTTGTGTTCCGCACCGAAGCCTCCTACGCTCGCTTCGTCGAGGGCAAGAAGGCCTGGACCAACGTCATCGCCGGTACCCACGATTTCGCCAGACAAGCCGCCGCCTTCCTGGACGAGGTTGATAACGCCGACTTCTCCGTTAAGCACGCGCTTTTGCAGTACATCATCGCCTTCCCCATTGCGCTTAAGTGCCACGTGCTGTATGGTTCGGATATTAGGAGAGATCTTCAGCATTTGCTGGAAGTGGATGATCTAGCAGTGGTAATGAATTCAAAGCACCAGCCACGCTGCATTATTGAGTTTATATCGCAGAGCATTCGGTTGCTGAAATTGGAGGAGTCTAGAAGAAATGTGCTGGAATCAAAGATCTCTTGTTTCCATGAAGGAATTGGCATATGTGAACAACTTATGGGCATTCCCATTCCATTATCATATACTCGTTTGACATCAAGGTTCCTTGTCCTGTGGCATCTGACACTACCTATCATACTTTGGGACGATTGTCATTGGATTGTGGTTCCTGCAACTTTTATTAGCGCTGCCTCTTTGTTTTGCATTGAAGAAGTTGGAGTTCTCATTGAGGAGCCATTTCCAATGCTTGCACTTGATGAACTATGCCAAAAGGCACAGAATGATATCCAAGAAGCAATTGCAACCGGGAATTTAATCCATGCACGCTTTGTTGCTAAGAAAAATAGCCACTCTGAAGAGCATTCACCAAATGGCTGGCCCAACTCCTAA 1236 0.5332 MYHQPRTQQLKPTTFFSSLFCPKCPLNHNLLLLLPKPNKKPTISASLPTGPASGPDQALISLLRSIPDWADTVQERGMQKKRSLYTHLNWRDHRSSIRHLRHLLSSLSSRVILSLVPPVLFFTGFAAAIASYNQALILHILPDFLPLLHSSSLPYQLTAPALALLLVFRTEASYARFVEGKKAWTNVIAGTHDFARQAAAFLDEVDNADFSVKHALLQYIIAFPIALKCHVLYGSDIRRDLQHLLEVDDLAVVMNSKHQPRCIIEFISQSIRLLKLEESRRNVLESKISCFHEGIGICEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCQKAQNDIQEAIATGNLIHARFVAKKNSHSEEHSPNGWPNS* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0590 411 PANTHER UPF0187 PROTEIN YNEE 33 408 IPR044669 -
Vra9g0590 411 Coils Coil 364 384 - -
Vra9g0590 411 Pfam Bestrophin, RFP-TM, chloride channel 93 371 IPR021134 GO:0005254
Vra9g0590 411 PIRSF UCP016988 17 411 IPR024701 GO:0005247|GO:0042548
Vra9g0590 411 PANTHER BESTROPHIN/UPF0187-RELATED 33 408 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0590 K08994 - gmx:100790216 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0590 9 6663409 6667180 Vra9g0590 9 6663409 6667180 ECH