Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0585 ATGGAGAATGACAATCAAAGGCCTAAATTGACTTTTGAGAAGTACACATGGAGGATCAACCGCTTCTCTTATTTCAAACGGAGACTATATAGCTCCGACAAATTTATACTGGATGGTTTTCCATGGTACCTAATTAGCTTCCCAGTTAGAGGTCCCTTGGAAATTTATTTACAAGCTCATCATAAGAGTTGTGCAGATTTACCTGAGGACTGGAAAAGAACTGTAAATGTAAGTTTTGCTCTAATTAACCAGGTTAATGACCAGAAGACTATAAGAAAAGGAATGGAATTTGAGTTTAGTGCAGATTTCCTTCGTAGTAAATCTTTTGTATTTTACAATGATTTCAATCATAGTAGTGGGTTTATTGTAAATGATACTTGTATGATTGAAGTTGGGATTTTTGTGATGAAGAATGTGTACGAGAATGAACAATATCGGACTGTACATAAGAATCCTGACACCGAAAATCCTTTATTTCATGAAATGTTCATGACATCATTTGCAAATATAGATCTAAATTATGTTCCATTATTAGAAAAAGTATGTCTACAATATCCCTATCTTCTTGTAAGTCAAGAAAAGAGGAGTTGCCAGTTTACTGAATGGGCATTCATAGCTTTGGGTCGAGTTCTTTATTTTCTGAACACTAAAAAGGTCAAAGATATGAATGATGAAGCATGTATTCATCTCAAAAAATTATGGGATGAAGTTAAGATATTTGGGTTTGATTTGAGTTGGTTAGAATTTGATGTTAAATCTGCCATAAATTTGAAAAATTATAGGGAAAAGACTGCCAATGTAAGAAAGGCTAAGGCTGCAGTGATTGAAAGAGAGATCGAACTTGAAAGGGTAAAAAGAGACTTGGTGAAAGCAGAAGAAGGATTTGAAAAACGCGATTTGGATGACGTATTAGGATATGGAAGATTAAAGAATTGA 936 0.3387 MENDNQRPKLTFEKYTWRINRFSYFKRRLYSSDKFILDGFPWYLISFPVRGPLEIYLQAHHKSCADLPEDWKRTVNVSFALINQVNDQKTIRKGMEFEFSADFLRSKSFVFYNDFNHSSGFIVNDTCMIEVGIFVMKNVYENEQYRTVHKNPDTENPLFHEMFMTSFANIDLNYVPLLEKVCLQYPYLLVSQEKRSCQFTEWAFIALGRVLYFLNTKKVKDMNDEACIHLKKLWDEVKIFGFDLSWLEFDVKSAINLKNYREKTANVRKAKAAVIEREIELERVKRDLVKAEEGFEKRDLDDVLGYGRLKN* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0585 311 Pfam MATH domain 19 134 IPR002083 GO:0005515
Vra9g0585 311 ProSiteProfiles MATH/TRAF domain profile. 12 133 IPR002083 GO:0005515
Vra9g0585 311 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 1 291 - -
Vra9g0585 311 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 11 149 IPR008974 GO:0005515
Vra9g0585 311 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 1 291 - -
Vra9g0585 311 CDD MATH 14 133 IPR002083 GO:0005515
Vra9g0585 311 SUPERFAMILY TRAF domain-like 14 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0585 Vra-Chr9 6565062 6566360 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0585 - - vra:111242550 315.079