Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0583 ATGGAGAATTACAAGGAAAGGCCTAAATTGATTTTTGAGAAGTACACGTGGAGGATCAACAACTTCTCTAAATTGAAATGTGAAGAACATTACTCCGAGAGTTTTATACTCAATGGTTTTCCATGGTACATGGTTAGCTGCCTAGTTGGAGGTATCTTGGGAATTTATTTAGAAGCTGATAAGAATTGTGCATATTTACCAAAGGACTGGAAAAGAACTGAAAATATCAGTTTGGCTCTAATTAACCAGGTTAATGACCAGAAGACTATAAGAAAAGGATCGGAATGTGAGTTTAGTACAGATGACCCTTTTAGCAAATATTTTATGTTTTTCAATGGTTTGGATGAACCTAGCAGTGGGTTTATTGTGAATGATACTTGTATCATTGAAGCTGGGATTTTTCTGATCAAGAATGTGTACGAGAATGAACTATATCATACTCCACGCATGTTTGATAAGAATGCTAACCCCAAAAATCCTTTATTTCATGAAATGTTCATGCGATCATTTACAAATATAAATCTGAATTATGTTCCACTATTAGAAAAAGTGAAAGATATGGATAATGAAGCATGTAATTATTACAAAAAAATATGGGATGAAGTTAAGATATTTGGGTTTGATTTGAGTTGGATAGAATCTGAATTTAAATCTGCCTCAAATTTGAAAAGTTATATGGAAAATGCTGCTAAGGTGAGAAAGGCTAAGGTGATAATGAATGATTTGGAAACTAGAACAGAGAAGCTGAAAGAAGCCGTGATTGAAACAGAGACAGAACTTGAAATGGCGAAAAGAGACTTTGAGAGAGCAAAAGAAGGATTTGAAGAAAGCAATTTGGATGAAGGGTCCTTGTTTTGA 858 0.3392 MENYKERPKLIFEKYTWRINNFSKLKCEEHYSESFILNGFPWYMVSCLVGGILGIYLEADKNCAYLPKDWKRTENISLALINQVNDQKTIRKGSECEFSTDDPFSKYFMFFNGLDEPSSGFIVNDTCIIEAGIFLIKNVYENELYHTPRMFDKNANPKNPLFHEMFMRSFTNINLNYVPLLEKVKDMDNEACNYYKKIWDEVKIFGFDLSWIESEFKSASNLKSYMENAAKVRKAKVIMNDLETRTEKLKEAVIETETELEMAKRDFERAKEGFEESNLDEGSLF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0583 285 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 12 146 IPR008974 GO:0005515
Vra9g0583 285 Coils Coil 232 266 - -
Vra9g0583 285 SUPERFAMILY TRAF domain-like 14 139 - -
Vra9g0583 285 CDD MATH 14 133 IPR002083 GO:0005515
Vra9g0583 285 ProSiteProfiles MATH/TRAF domain profile. 12 133 IPR002083 GO:0005515
Vra9g0583 285 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 12 140 - -
Vra9g0583 285 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 154 266 - -
Vra9g0583 285 Pfam MATH domain 19 133 IPR002083 GO:0005515
Vra9g0583 285 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 154 266 - -
Vra9g0583 285 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 12 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0583 Vra-Chr9 6548287 6549457 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0583 - - vra:111242550 589.726