Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0582 ATGGAGAATGACAACAAAAGGCCTAAATTGACTTTTGAGAAGTACACATGGAGGATCAACAACTTCTCTAAATTGAAAAATCAACGACATCACTCCGACAATTTTATACTGGATGGTTTTTCATGGTACATGGTCAAAATCCCAGTTGGACGATGTTTCTTTAAAATTTATTTAGAAGCTGATGAGAATCGTGCAAATTTACCTGAGGACTGGAAAAGAACTGAAAATATCAGTTTGGCTGTTAATGACCAGAAGACTATAAGACAAGGATTGGAATGTGAGTTTAATGCAGATGTCACTTGTAGCAAACATTTTGTATTTCTCAATGATATCAATGAACCTAGTAGTGGGTTTATTGTGAATGATGCTTGTATGATTGAAGTTGGGATTTTTGTCATCAAGAATGTGTACGAGAATGAACAATATTGGACTGGACGCGAGATTGATAAGGATCTTCACACCGAATATCCTTTATTTCATGAAATGTTCATGAGATCATTTGCAAACATAGATCTAAATTATGTTCCATTATTAGAAAATATATGTCTACTATATCCTTATCTTCTTGTAAGTCAAGAAAAGAGAAGTTGCAAGTTTACTGAATGGGCATTCACAGCTTTGGGTCGACTTCTTTATTTTTTGAATACTAAACAGGTCAAAGATATGGATGATGAAGCATGTGATCATCTCAAAAAATTATGGGATGAAGTTAAGATATTTGGGTTTGATTTGAGTTGGTTAGAATCTGATGTTAAATCTGCCTTAAATTTGAAAAATTATACGGATAAGATTGCTAATGTAAGAAAGGCTAAGGAGAGAGTGGATGATTTGGAAATTAGAACACAGAAGCTGAAGGCAGAAGTCATTGAAAGAGAGACCGAATTTGAAAGGGCAAAAACAGACTTGGTAAAAGCAGAAGAAGGATTTAAAGAACGTAATTTGGATGACATATTAGGATATAGATCAAAGAAGTGGTTCTAA 981 0.3384 MENDNKRPKLTFEKYTWRINNFSKLKNQRHHSDNFILDGFSWYMVKIPVGRCFFKIYLEADENRANLPEDWKRTENISLAVNDQKTIRQGLECEFNADVTCSKHFVFLNDINEPSSGFIVNDACMIEVGIFVIKNVYENEQYWTGREIDKDLHTEYPLFHEMFMRSFANIDLNYVPLLENICLLYPYLLVSQEKRSCKFTEWAFTALGRLLYFLNTKQVKDMDDEACDHLKKLWDEVKIFGFDLSWLESDVKSALNLKNYTDKIANVRKAKERVDDLEIRTQKLKAEVIERETEFERAKTDLVKAEEGFKERNLDDILGYRSKKWF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0582 326 ProSiteProfiles MATH/TRAF domain profile. 12 130 IPR002083 GO:0005515
Vra9g0582 326 CDD MATH 14 130 IPR002083 GO:0005515
Vra9g0582 326 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 1 305 - -
Vra9g0582 326 SUPERFAMILY TRAF domain-like 14 136 - -
Vra9g0582 326 Coils Coil 257 294 - -
Vra9g0582 326 Pfam MATH domain 19 131 IPR002083 GO:0005515
Vra9g0582 326 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 11 156 IPR008974 GO:0005515
Vra9g0582 326 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0582 Vra-Chr9 6527460 6528822 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0582 - - vra:111242550 359.377