Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0581 ATGGAGAATGTAGATTTCAGAGAAGAATCATCAAATTGTGTCAATGAAGTAGAAAACACCAATTCTGTGCTTATCTATGGCCTTCCAGATGATATATCTCTTATGTGCCTGGCAAGAGTTCCTAGAAAATATCATCCAGTCCTGAAGTGTGTCTCAAAGAGATGGAGGGACTTAATTTGTAACGAAGAGTGGTGCACTTACCGTCGGAAGCACAAATTGGATGAAACCTGGATTTATGCTCTGTGCAGGGACAAATTAAATGAGACTTTCTGTTATGTTTTGGATCCAACCGCCTCAGTAAGAAATTGGAAGCTGGTTGATGGTATTCCACCTCACATCTCAAAAAGAAAAGGCATGGGTTTTGAAGCTTTGGGAAATAAGCTATTCTTGTTGGGTGGTTGTAGCTGGTCAATAGATTGTACTGATGAGGTTTATTCATATGATGCTTCCTCAAACTGTTGGGTTCAAGCTACTTCCATGTCAACTGCTAGGTGCTTCTTTGCTTGTGAAGTTTTGGATGAAAAACTATATGCTATCGGAGGGTTAGCTTCAAATCCAACATATTCTCATTCTTGGGATACTTTTGACCCTCTGACAAATTGTTGGAGATCTCAAAGAGATATTGCTGTTTTTTCTGATGTTGAAGATTCAGTAGTTCTTGGTGGGAAGATATACGTCCGGTTTTCCAGATACCCTGTAACTCCTCATTTATTTGCCATTGTATATGAACCATCAAGTGGCACATGGCAGTATGCAGATGCTGACATGGTTTCAGGGTGGACAGGCCCTGCAGTTGTTGTGGAGGACACCCTTTATGTCTTGGATCAAACTTTAGGAACTAGGTTAATGATGTGGCACAAAGGGAGACGCCAGTGGATACAGGTTGGAAAACTATCACCACTGCTTACTAGACCACCTTGTCAGCTTGTTGCAGTTGGTAGAAGCATTTTCATTGTTGGGAAAATGCTTAGCACTGTGGTTGTTGATGTTGGTAATTTGGGGAATGAGGGCCAGGTGTTGATGAGTTCTTCCATACCAGGATTGTTATCTGATTTCACTGTAATAAGTTGTAAATGCTTAGCAATCTGA 1089 0.4096 MENVDFREESSNCVNEVENTNSVLIYGLPDDISLMCLARVPRKYHPVLKCVSKRWRDLICNEEWCTYRRKHKLDETWIYALCRDKLNETFCYVLDPTASVRNWKLVDGIPPHISKRKGMGFEALGNKLFLLGGCSWSIDCTDEVYSYDASSNCWVQATSMSTARCFFACEVLDEKLYAIGGLASNPTYSHSWDTFDPLTNCWRSQRDIAVFSDVEDSVVLGGKIYVRFSRYPVTPHLFAIVYEPSSGTWQYADADMVSGWTGPAVVVEDTLYVLDQTLGTRLMMWHKGRRQWIQVGKLSPLLTRPPCQLVAVGRSIFIVGKMLSTVVVDVGNLGNEGQVLMSSSIPGLLSDFTVISCKCLAI* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0581 362 SMART kelc_smart 175 221 IPR006652 GO:0005515
Vra9g0581 362 SMART kelc_smart 127 174 IPR006652 GO:0005515
Vra9g0581 362 Pfam F-box domain 27 61 IPR001810 GO:0005515
Vra9g0581 362 SUPERFAMILY Kelch motif 89 323 IPR015915 GO:0005515
Vra9g0581 362 SMART fbox_2 28 68 IPR001810 GO:0005515
Vra9g0581 362 Pfam Kelch motif 163 204 IPR006652 GO:0005515
Vra9g0581 362 Pfam Kelch motif 116 161 IPR006652 GO:0005515
Vra9g0581 362 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 13 337 - -
Vra9g0581 362 Gene3D - 69 338 IPR015915 GO:0005515
Vra9g0581 362 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 13 337 - -
Vra9g0581 362 SUPERFAMILY F-box domain 25 64 IPR036047 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0581 28 303 Miscellaneous Gene Families AT4G33900 27.575 7.10e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0581 - - pvu:PHAVU_010G098100g 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0581 9 6515836 6518939 Vra9g0581 9 6515836 6518939 ECH