Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0579 ATGTCATTTTTGTGTGGGCTTCCTGTCATTGAGTGTGTTTATTGTCTGGCCTGTGCTCGTTGGGCATGGAAAAAATGTCTGTACAGTGCAGGCTATGAGAGTGAAAATTGGGGGCTGGCTACTGCACAAGAATTTGAGCCTGTTCCTCGGATCTGTCGGCTAATCTTAGCTGTCTACGAAGATGATATTCGTAACCCTCAATGGGCTCCCGAAGGAGGTTATGGCATTAATCCTGATTGGGTTATCTTACGGAAGGACTACGGCGATAACCAAGGCCGTGTTACACCATACATGATATACCTTGATCATGATCATGCTGAAATCATACTAGCTGTTAGTGGACTCAATTTAGCAAAGGAAAGTGATTATGTTGTTTTGCTTGATAATAAGCTGGGACAGGCTGAATTTCATGGTGGTTATGTTCATAATGGGTTATTGAAGGCAGCTGGATGGGTTTTTGATGCAGAATATGAGGTTCTTAGGAAGCTAGTGGCAGAAAATCCAACTTATATGTTAATATTTACAGGGCATTCTCTAGGGGCTGGGGTGGTGGCATTGTTGACAATGCTAGCAGTTCATAATCGAGACAAATTGGGTATACCGAGAAACAAGATAAGATGCTTTGCAATAGCTTCTCCTCGGTGTATGTCTCTCAACTTGGCTGTAAGATATGCAGATGTGATCAATTCTGTTGTACTCCAGGATGATTTTTTACCTCGGACGACTGCTGCTTTGGAAGATGTCTTCAAATCACTTTTATGGATACCTGCACATTGGAGGAGAAGAAGCTCAGAGATCCAAGGCGTCTATATGCACCTGGTCGGCTCTATCACATTGTGGAGCGAAAACCATTTAGTCTCTTCTGGTTGCAGGATGGGAAGATTTCCACCTGTTGTTAGGACAGCAGTACCTGTTGATGGGAGGTTTGAGCATTTAGTTCTTTCTTGCAATGCAACTTCTGATCATGCCATCATTTGGATAGAGAGAGAATCCCGACGGGCACTCAGTTTAATGCGAGACAAAGACGAGCATATGGAGATTCCAGCAAAGCAGAAAATGGAGAGACATGAATCCATAGCTCGAGAACACAGTGAAGAGTACCATGCAGCCCTTCAGAGAGCAGTTGCTTTGGATATTCCACAGGCATACTCCCCTTCATCATATGGAACATTTCATGAAACTGATGTTGGAGAGGATTCTGGAAGATCAAGTGAAGGTTCTTCCTTGTTTCATAAGAAACGAACACAAAGTTGGAATGAATTTGTTGGACGATTGTTTGATGTGGATGATTCAGGTCATATGGTGTTCAAAAAGACACCTCCATGA 1326 0.4306 MSFLCGLPVIECVYCLACARWAWKKCLYSAGYESENWGLATAQEFEPVPRICRLILAVYEDDIRNPQWAPEGGYGINPDWVILRKDYGDNQGRVTPYMIYLDHDHAEIILAVSGLNLAKESDYVVLLDNKLGQAEFHGGYVHNGLLKAAGWVFDAEYEVLRKLVAENPTYMLIFTGHSLGAGVVALLTMLAVHNRDKLGIPRNKIRCFAIASPRCMSLNLAVRYADVINSVVLQDDFLPRTTAALEDVFKSLLWIPAHWRRRSSEIQGVYMHLVGSITLWSENHLVSSGCRMGRFPPVVRTAVPVDGRFEHLVLSCNATSDHAIIWIERESRRALSLMRDKDEHMEIPAKQKMERHESIAREHSEEYHAALQRAVALDIPQAYSPSSYGTFHETDVGEDSGRSSEGSSLFHKKRTQSWNEFVGRLFDVDDSGHMVFKKTPP* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0579 441 Pfam Lipase (class 3) 116 243 IPR002921 GO:0006629
Vra9g0579 441 CDD Lipase_3 44 240 - -
Vra9g0579 441 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 257 - -
Vra9g0579 441 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 288 439 - -
Vra9g0579 441 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 288 439 - -
Vra9g0579 441 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 257 - -
Vra9g0579 441 MobiDBLite consensus disorder prediction 388 409 - -
Vra9g0579 441 MobiDBLite consensus disorder prediction 395 409 - -
Vra9g0579 441 Pfam Lipase 3 N-terminal region 10 74 IPR005592 GO:0016042
Vra9g0579 441 SUPERFAMILY alpha/beta-Hydrolases 44 243 IPR029058 -
Vra9g0579 441 Gene3D alpha/beta hydrolase 39 267 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0579 Vra-Chr9 6483543 6495792 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0579 1 438 Miscellaneous Gene Families AT4G00500 60.579 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0579 - - gmx:100800227 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0579 9 6483543 6495792 Vra9g0579 9 6483543 6495792 ECH