Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra9g0576 | ATGAACAAAAAAACTCACAGAATGAAGAGAGGAATTCTTGAAGTACTTGTTGTCAATGCAAAAGGCATCATACACACCAATCTTGTCGGAACACCCTCTTACTATGTGATTATTGAGTGTGGCACTCAGACTCGAATAACCAAAGTTTCATCAGGAAAACATGAGAAACCTCGGTGGAATGAGAAATTCATATTTGATTTGTCAGAGTTTGATTGCAAGAATTCAACCTATCTTAAATGTAGAATCATGGACAAAGAACTCTTCAGAAATGCTGGATTTGTTGGTGAAGCCAAAATTTTCATAGGTGGAATTTTATTGGAAGGAAGTGAGCAGGGAGACATAGAAATACAACCAGCTGCATATAATGTGGTTCTTCAAGATCACACTTACAAAGGACAGATAAAGATTGGATTTAAATTCATTGCTAATAACAATGAAAAGTACTCGATGGAGAAACCAGACCAATTCAAGGCTTCTGAGAAGAAGGAATCATCCAATTCAATTTTTGGATGGATTTGGAGAATATCATTGTGGAAAATCTTGTTTTTCTGTCAACACAAAAGTTCTAAAAGTCATTAA | 579 | 0.3523 | MNKKTHRMKRGILEVLVVNAKGIIHTNLVGTPSYYVIIECGTQTRITKVSSGKHEKPRWNEKFIFDLSEFDCKNSTYLKCRIMDKELFRNAGFVGEAKIFIGGILLEGSEQGDIEIQPAAYNVVLQDHTYKGQIKIGFKFIANNNEKYSMEKPDQFKASEKKESSNSIFGWIWRISLWKILFFCQHKSSKSH* | 193 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra9g0576 | 192 | PANTHER | C2 DOMAIN-CONTAINING | 8 | 190 | - | - | |
| Vra9g0576 | 192 | Pfam | C2 domain | 11 | 106 | IPR000008 | - | |
| Vra9g0576 | 192 | PANTHER | CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN | 8 | 190 | - | - | |
| Vra9g0576 | 192 | Gene3D | C2 domain | 9 | 142 | IPR035892 | - | |
| Vra9g0576 | 192 | SMART | C2_3c | 12 | 113 | IPR000008 | - | |
| Vra9g0576 | 192 | ProSiteProfiles | C2 domain profile. | 1 | 114 | IPR000008 | - | |
| Vra9g0576 | 192 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 7 | 141 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra9g0576 | Vra-Chr9 | 6438442 | 6440667 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra9g0576 | - | - | vra:106773209 | 397.127 |