Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0571 ATGCAAAGGTATCATGCTGGCAGCTGCACTAGTGCAGTTAATAACAGTGCAATAGGTGGACCTTCTACCAGGGACACCGGAAGATCTGATTCACCTTCTTTGCCTGCTAACTTCTCTGTAAGTTCAAGGCGACAACCACCGTTAAACCCATACAAGTTGAAGTGTGATAAAGAACCCTTGAACTCTAGGCTTGGGGCACCAGACTTTCATCCCCAAACATCAAATTGTCCCGAGGAGACCTTGACCAGAGAATATTTGCAATCTGGATACAGGGACACAGTTGAGGGACTCGAGGAAGCCAGAGAAATTTCTCTGACACAGGTTCCACATTTTAACAAGAATGTTGTTCTTACTTGCAAAGAGGCTATTAGAAAACGTTTGAGGGCCATCAATGAATCTCGTGCTCAGAAGAGGAAGGCTGGTCAAGTATATGGTGTAGCTCTTTCAGGATCTCAACTTGCCAGGTCTGGAATTTTCCCAGAACTAAGACCTTGTGGTGAGGAATTCCAGAAGAAATGGATTGAGGGTTTATCTCAGCAGCACAAGCGGTTACGCTCTTTAGCTGATCATGTTCCTCATGGTTATAAAAGGGCATCACTTTTAGATGTTCTTATAAGGAATAACGTTCCATTGCTTAGGGCCACCTGGTTTATCAAGGTTACTTACCTCAATCAGGTTCAACCTGGTTCTGTTGGTATTTCTTCTGGAACTGCTGACAAGATTCAACTCTCACGCTCTGATGTTTGGACCAAAGATGTTATCAATTACTTGCAAGCCCTTCTGGATGAATTTTTGTCAAAGAATGTTTCCCATTCTGCTTCTCATGGACGAGAGCGATCACCACAAATACCTGGACCACTGCAGAACAAAAGTGATCCATTATTATCTGTTACTGATGGTGAAGGACCATCCTTACATTTTAGATGGTGGTATATTGTACGGCTTCTGCAATGGCATCATGCTGAAGGGCTGCTTCATCCATCTCTTGTCATTGACTGGGTGTTTACTCAACTACAGGAAAAAGATCTGCTTGAGGTTTGGCAGCTGTTATTGCCTATTATATATGGTTTTTTAGAAACTATTGTACTATCTCAAACTTATGTGCGTACCCTTGCTGGACTAGCTCTTCGTGTCGTTCGTGATCCTGCTCCAGGTGGTTCAGATCTAGTAGATAATTCCAGGAGGGCATACACAACTTGTGCTGTGATTGAGATGCTTCAGTATTTAATACTTGTGGTGCCAGATACTTTTGTTGCTTTGGATTGCTTTCCTTTACCTTCTTCTGTTATTTCACATACAATGAACGATGGGAATTTTGTACTAAAATCAACTGAAGCTGCAGGGAAGGTAAAAAATAGTTCAGATGATTTTGGTCGCATTATTTCACGCATTCAGAAACATACAGAGGATCTTGCTAAGGCTTCAATCCCAGGCTCTCCAGGTCATTGTCTGGCTAAAGTGGCAAAAGCCTTGGATAAGGCTCTTGTTCTGGGTGATTTGCATGTTGCGTATAAATTTCTTTTTGATGATCTTTGTGGTGGAACTGTATCTGAAGGCTGGGTTGCAAAAGTCAGCCCTTGCTTAAGGTTATCTTTGAAATGGTTTGGGACTGTGAATACACCCCTTATATATTCTGTGTTTTTCCTTTGTGAGTGGGCAACATGTGATTTTAGGGATTTTCGTGGTTCCCCTCCTCATGACATTAAGTTTACTGGTAGGAAAGATCTTTCCCAGGTGCATATAGCTGTTAGGCTATTAAAGATGAAGATTAAGGATGTGAAGATTTCACTGAAACAAACAAATGAATACCACAGAGCCAGTCGTTTTGCAAAGAATTCGGGTCAGCGGCCTAATTCAAATTATGTGGGTAAAGTATCCAGACTGAAATCTAGTTCAAAAAGTACAGGTTCTTCAGTTATATTTGAAAGCCCAGGACCACTGCATGATATTATAGTATGCTGGATTGATCAGCATGTGGTACATAAAGGGGAAGGTTCCAAGCGCCTACAACTATTTATGGTGGAACTCATACGTGCTGGCATCTTTTATCCCTTGGCATATGTACGCCAGCTGATAGTCAGCGGGATCATGGATGCGAATGTAAATTTGGTTGACATGGAGCGACGGAGGAGACACTATCGCATCTTAAAGCAGTTACCTGGATGCTTTATCCATGATGTTTTGGAAGAGTCAGGAATTGTTGATGGGGTGCATCTCAAAGAAGCATTACAAATTTACTTGAATGAACGTCGCCTCATACTTCGGGGTCCTCTAAGTGAGTCCCATGATGATGCCAGTGGTACTGATTTACCTCCTCTAAAGAGAAAAAAATATCCTGCTTCAATAAAGGATGAAGTTTCTGGAATTACCATTGATCAGAGAAATGCTATTTCTACCACAAAAAATGTAAAGGATAATGCTAAGATTGAAGAACTAAGAACAGCTATTTCAGTACTGTTACAGCTACCTAATTGTTCATCGAATTTGAGTGCTACAGGCTGTGATGAATCTGAAGGCACTGTTAGAAGATCTATTGGGTCTCAGAACAGCAAAATTGATCCAGTGGAGGGTACACCTGGGTGTGAAGAATGTAGCAGAACAAAGAGACAAAAGTTAAGTGAGGAAAGAAACTCATTCGTACAAGGGAATTCCCCAGTTCAATCTGATGATGACGATGCATGGTGGGTGAAAAAGGGAATGAAATCCCCGGAGCCTCTCAAAGTTGATCAACCACAAAAGTTAACCAAGCAGGTCACGAAGAGTAGGCAGAAGAATGTGCGTAAAACTCAGAGTCTCGCTCAACTGGCAGCTTCTAGAATTGAGGGTAGCCAAGGGGCATCAACTAGTCATGTTTGTGGAAGCAAGGTAAACTGCCCTCACCATAAAACTGCTATGGATGTGGATGGGCAGAGGTCTGTGGATATCATCCCCACAAGTCATTTTGGAGATATAGTTTCCATTGGAAAAGCTCTAAAGCAGCTACGTTTTGTTGAGAAAAGGGCGCTAGCCATTTGGCTGCTGAGTGTTGTTAGACAGGTAATTGAAGAGACGGATAAAAATATTGGTAAAGTTGGTCAGTTTGGCAGGCCTTTTTCTGTTGCTGATGATAGAAGCTCTATAAGGTGGAAACTGGGTGAGGATGAACTTTCTGTGATGCTGTATTTGATGGATATCTCCCATGATTTGGTATCAGCTGTCAAGTTCCTCCTTTGGTTGCTGCCTAGGGTTCTTAATAGCCCCAATTCCACAATTCATTCTGGGAGGAATGTGCAGATGCTAGCAAGGAATGCGGAAAACCAAGTTTGTGACGTGGGAGAGGCTTTTCTGCTTTCATCACTGAGAAGGTATGAGAACATTCTTGTTGCAGCAGATCTTATTCCAGAAGCCTTGTCATCTGCAATGCATCGAGCTGCCACAATTGTTGCATCTAATGGAAGAGTTTCAGGGTCAGGGGTCCTAGCTTTTGCTCGGTACTTGTTGAGAAAATATGGCAATGTGGCTAGTGTCATTGAGTGGGAGAAAACTTTTAAGGCTACATGTGACACAAGACTTTCCTCTGAACTTGACTCTTGTAGATCAGTGGATGGAGAGTTAGGGCTGCCCCTAGGTGTTCCAGCAGGAGTAGAAGACCATGATGATTTTTTCCGTCAGAAGATCAGTGGTGGTCGGTTGCCATCCAGAGTAGGTGCAGGCATGAGGGAGGTAGTGCAGCGTAATGTTGAAGAAGCATTCCGCTTTCTTTTTGGAAAGGATAGAAAGCTCTTTGCTGCTGGTACACTAAAAGGTCTTCCTCCTGTAGAAAAATGGGACAATGGATATCAAATTGCTCAACAAATAGTTATGGGTTTGATTGATTGCATAAGGCAGACTGGTGGTGCTGCTCAAGAAGGAGATCCCTCTTTGGTCTCTTCTGCAGTTTCTGCAATTGTTGGCAGTGTTGGTCCAACTTTAGCAAAAATCCCCGATTTTTCATCTGGCAGCAATCATTCAAATATAACATCAGCTTCAAATTTATTGAACGATGCCAGGTGCATTCTGCGAATGCATATAACCTGTCTAGGCCTGCTTAAGGAAGCCTTAGGAGAACGACAAAGCCGTGTATTTGATATTGCACTTGCTACTGAAGCTTCTACTGCTCTAGCTGGCGTTTTCACTCCTAGTAAAGCATCTCGTTCTCAGTTTCAAACATTTCCTGAAGTCCATGATTCTAGTAACACTATTTCAAATGATATGGGAAGCAGCTCTAATAAAGTCGTGGTAGCAAAAACCACAAAAATTGCTGCTGCTGTTTCTGCACTTTTTGTTGGTGCAATTATATATGGTGTTACCAGCCTGGAAAGAATGGTAACAGTTCTCAGATTGAAGGAGGGTCTCGATGCAGTACAATTTGTAAGAAGCACTAGATCCACTTCAAATGGAAATGCTCGTTCAGTTATGGCTTTTAAGATGGATAGTTCAATTGAAGTTCATGTCCATTGGTTTAGACTGCTAATTGGAAACTGCAGAACAATATGTGAAGGGTTGGTGGTGGAACTCTTGGGCGAACCGTTTATTATGGCTCTTTCAAGGATGCAACGTATGCTTCCTTTAAATTTGGTCTTTCCACCTGCTTATTCAATATTTGCCTTTATTAGGTGGCGGCCTTTCATTTTGAATGCTACAGTTCGTGAAGACATGAATCAAACTTATCAGTCTCTTATAGTGGCCATAACTGAAGCAATAAAGCATTTGCCTTTTCGTGATGTATGTTTTAGAGATTGTCAGGGTCTTTATGATCTTATGTCGGCAGACAATAGTGATTCTGATTTTGCAAACCTGCTAGAGTTTAATGGTTCTGACATGCATTTAAAACTAACAGCATTTGTTCCTCTACGCTCTAGGCTTTTCCTTAACGCCATTATTGATTGTAAGATGCCACAGTCTATTTATGCAAAGGATGATGGGAGCCGGATTTCTGGACCTGGTGAGTCTAAAGTTAAACCCACAGACAGTGGGTCTAAGCTTCAGGACATGCTTGTGCATGTTTTGGATACCTTGCAACCAGCTAAATTTCACTGGCAGTGGGTTCTCCTCAGGTTACTTTTAAATGAGCAAGCCCTCATTGAAAAAGTGGAGAATCATGATGTGCCCTTGGCTGATGCTATAAAGTTGTCCTCACCTAGTCCTGAGAAGGCTGCTAGTGCTTCTGAGAATGAGAACAATTTTATTCAAATACTTCTCACTAGGTTACTGGTTAGACCTGATGCTGCACCCCTTTTTGCAGAATTGATTCATCTCTTTGGTAGGTCACTAGAGGATTCAATGTTGTTGCAAGCTAAATGGTTCCTTGGAGGCCAGGATGTCCTCTTTGGCCGGAAGGCCATTAGACAAAGGCTGCATAACATTGCTGTTAATAAAAAACTTTCTGTTAAGACCCAATTTTGGGAACCTTGGGGTTGGTGTAGTCCGACTACTGATTCATTGACTATCAAAGGGGATAACAAGAAGTTTGACAGCACCTCTCTTGAAGAAGGAGAAGTTGTTGAAGAGGGAACATATTTGAAAAGGTGCCAGCAGCAAGTGATTGAGAGGGCTCTTACCGAGTTGCTTCTTCCTTGCATAGATCAAAGCTCTGATGAAGCTCGCAATTCTTTTGCAACTGACTTGGTGAAACAGTTGAGTTATATTGAGACACACATAACTGCTATTACAGGTGGAAGTAAACCAGTGGGAAGTGCTCCTGCTGGAGTTGAAGGTCAGCCAAATAAAGTAAATAACCGCAAAAATTTGAGAACTGGAAGTGCTGCATTATCTAGACGACCAACAGTGGCAACAGATTCTTCTCCACCATCTCCTGCAGCCCTACGAGTTTCTATGTCATTACGTTTGCAGTTGCTCCTGAGATTTCTTCCTACTCTTTGCACTGACAGGGAGCCATCTGTGCGGAGCACAAGACAATTTCTTGCCTCTGTTATTTTTCGTCTCCTTGGTAGTCGGGTTGTGCATCAGGATGCAGACATTTCAGCAAATGCTGTGCCTCTGCCAACGAGGGAGGCAGAGTCATCTTCAGAAGTTGCTTCTGCTGCTTTTGTGGATTCTTCTTCTCAGAGTCTGTTTGATCGTTTGCTTTTGGTTTTACATGGGTTGCTAAGTAGTTATCCTCCAAGTTGGCTCCGACCAAAGCCTTCAAAGACAAGCAATGAACCTACAATTGATCGAGAATTGTTGGAGACTTTGCAGAATGAATTGGATCGTATGCAACTACCAGACACTGTTCGGTGGCGAATCCAAGCTGCAATGCCAGTACTCATCCCGTCTATGCGGTGCTCTCTATCCTGCCAGCCACCATCTGTTTCGAATTCTGCTCTTATGTGCATTCAACCGGGCACTACAAATCCTGGGGTTAACCCCAGTAGCTCAACTATCCCCCAGAGGGGTCCAGCTCTATCAAGGGTTGCATCAAATGTATCAGGGAAGCCAAAACGACAGGACAATGATTTGGAAATTGATCCTTGGACTCTTTTAGAAGATGGCGCTGGCTCTATCCCTCTGGCAGGTAATACTGCTAGCCTAGGAAGTGGTGATCATGTTAACATTCGAGCCGCAAGCTGGCTTAAAGGAGCTGTAAGGGTGAGACGGACCGACCTCACATATGTTGGTGCGGTAGATGATGATAGTTGA 6660 0.4285 MQRYHAGSCTSAVNNSAIGGPSTRDTGRSDSPSLPANFSVSSRRQPPLNPYKLKCDKEPLNSRLGAPDFHPQTSNCPEETLTREYLQSGYRDTVEGLEEAREISLTQVPHFNKNVVLTCKEAIRKRLRAINESRAQKRKAGQVYGVALSGSQLARSGIFPELRPCGEEFQKKWIEGLSQQHKRLRSLADHVPHGYKRASLLDVLIRNNVPLLRATWFIKVTYLNQVQPGSVGISSGTADKIQLSRSDVWTKDVINYLQALLDEFLSKNVSHSASHGRERSPQIPGPLQNKSDPLLSVTDGEGPSLHFRWWYIVRLLQWHHAEGLLHPSLVIDWVFTQLQEKDLLEVWQLLLPIIYGFLETIVLSQTYVRTLAGLALRVVRDPAPGGSDLVDNSRRAYTTCAVIEMLQYLILVVPDTFVALDCFPLPSSVISHTMNDGNFVLKSTEAAGKVKNSSDDFGRIISRIQKHTEDLAKASIPGSPGHCLAKVAKALDKALVLGDLHVAYKFLFDDLCGGTVSEGWVAKVSPCLRLSLKWFGTVNTPLIYSVFFLCEWATCDFRDFRGSPPHDIKFTGRKDLSQVHIAVRLLKMKIKDVKISLKQTNEYHRASRFAKNSGQRPNSNYVGKVSRLKSSSKSTGSSVIFESPGPLHDIIVCWIDQHVVHKGEGSKRLQLFMVELIRAGIFYPLAYVRQLIVSGIMDANVNLVDMERRRRHYRILKQLPGCFIHDVLEESGIVDGVHLKEALQIYLNERRLILRGPLSESHDDASGTDLPPLKRKKYPASIKDEVSGITIDQRNAISTTKNVKDNAKIEELRTAISVLLQLPNCSSNLSATGCDESEGTVRRSIGSQNSKIDPVEGTPGCEECSRTKRQKLSEERNSFVQGNSPVQSDDDDAWWVKKGMKSPEPLKVDQPQKLTKQVTKSRQKNVRKTQSLAQLAASRIEGSQGASTSHVCGSKVNCPHHKTAMDVDGQRSVDIIPTSHFGDIVSIGKALKQLRFVEKRALAIWLLSVVRQVIEETDKNIGKVGQFGRPFSVADDRSSIRWKLGEDELSVMLYLMDISHDLVSAVKFLLWLLPRVLNSPNSTIHSGRNVQMLARNAENQVCDVGEAFLLSSLRRYENILVAADLIPEALSSAMHRAATIVASNGRVSGSGVLAFARYLLRKYGNVASVIEWEKTFKATCDTRLSSELDSCRSVDGELGLPLGVPAGVEDHDDFFRQKISGGRLPSRVGAGMREVVQRNVEEAFRFLFGKDRKLFAAGTLKGLPPVEKWDNGYQIAQQIVMGLIDCIRQTGGAAQEGDPSLVSSAVSAIVGSVGPTLAKIPDFSSGSNHSNITSASNLLNDARCILRMHITCLGLLKEALGERQSRVFDIALATEASTALAGVFTPSKASRSQFQTFPEVHDSSNTISNDMGSSSNKVVVAKTTKIAAAVSALFVGAIIYGVTSLERMVTVLRLKEGLDAVQFVRSTRSTSNGNARSVMAFKMDSSIEVHVHWFRLLIGNCRTICEGLVVELLGEPFIMALSRMQRMLPLNLVFPPAYSIFAFIRWRPFILNATVREDMNQTYQSLIVAITEAIKHLPFRDVCFRDCQGLYDLMSADNSDSDFANLLEFNGSDMHLKLTAFVPLRSRLFLNAIIDCKMPQSIYAKDDGSRISGPGESKVKPTDSGSKLQDMLVHVLDTLQPAKFHWQWVLLRLLLNEQALIEKVENHDVPLADAIKLSSPSPEKAASASENENNFIQILLTRLLVRPDAAPLFAELIHLFGRSLEDSMLLQAKWFLGGQDVLFGRKAIRQRLHNIAVNKKLSVKTQFWEPWGWCSPTTDSLTIKGDNKKFDSTSLEEGEVVEEGTYLKRCQQQVIERALTELLLPCIDQSSDEARNSFATDLVKQLSYIETHITAITGGSKPVGSAPAGVEGQPNKVNNRKNLRTGSAALSRRPTVATDSSPPSPAALRVSMSLRLQLLLRFLPTLCTDREPSVRSTRQFLASVIFRLLGSRVVHQDADISANAVPLPTREAESSSEVASAAFVDSSSQSLFDRLLLVLHGLLSSYPPSWLRPKPSKTSNEPTIDRELLETLQNELDRMQLPDTVRWRIQAAMPVLIPSMRCSLSCQPPSVSNSALMCIQPGTTNPGVNPSSSTIPQRGPALSRVASNVSGKPKRQDNDLEIDPWTLLEDGAGSIPLAGNTASLGSGDHVNIRAASWLKGAVRVRRTDLTYVGAVDDDS* 2220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0571 2219 MobiDBLite consensus disorder prediction 2126 2161 - -
Vra9g0571 2219 MobiDBLite consensus disorder prediction 831 854 - -
Vra9g0571 2219 MobiDBLite consensus disorder prediction 273 294 - -
Vra9g0571 2219 MobiDBLite consensus disorder prediction 2126 2153 - -
Vra9g0571 2219 MobiDBLite consensus disorder prediction 1900 1945 - -
Vra9g0571 2219 PANTHER RNA POLYMERASE II TRANSCRIPTION MEDIATORS PROTEIN 1 2219 - -
Vra9g0571 2219 MobiDBLite consensus disorder prediction 912 931 - -
Vra9g0571 2219 MobiDBLite consensus disorder prediction 1 46 - -
Vra9g0571 2219 MobiDBLite consensus disorder prediction 831 931 - -
Vra9g0571 2219 Pfam Transcription mediator complex subunit Med12 160 219 IPR019035 GO:0003712|GO:0006357|GO:0016592
Vra9g0571 2219 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 1 2219 - -
Vra9g0571 2219 MobiDBLite consensus disorder prediction 1915 1945 - -
Vra9g0571 2219 MobiDBLite consensus disorder prediction 1 76 - -
Vra9g0571 2219 SMART Med12_2 158 219 IPR019035 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0571 Vra-Chr9 6390116 6406619 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0571 - - gmx:100781696 3754.14