Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0547 ATGGAGACACAAGGACCATTGAAAATATACTTCCTTCCATTCTTCGCACAAGGCCATCAAATCCCAATGATTCAGCTCGCACGCTTGGTCGCCTCACGTGGCCAGCACATCACAATCGTCACCACTTCCGCCAACGCCCAACTCTTTCAAAAAACCATCGACGACGACATAGCCTCCGGCCACCACATCCGCCTCCACCTCCTCAAATTCCCCAGCACCCAATTGGGTCTACCGGAAGGCGTAGAAAATCTCGTTTCAGCCACAAACAACATCACCGCCGGAAAAATCCACATGGCGGCGCACTTCATCCAGCCTCAGGTCGAAGCTGTCCTCAAAGACTCCCCTCCCGATGTCTTCATCCCTGACATCATCTTCACCTGGACCAAGGACTTGTCAAAGCGTCTTCAAGTCCCCAGGCTCGTCTTCAACCCCATATCCATCTTCGACGTCTGCATGATCCAGGCCATCAAAGCCCACCCCGAGGCCTTTCTCTCCGATTCCGTGCCCTACCAGATTCCGGGTCTCCCTCACCCTCTCAGTCTCCCGGTCAAACCCTCGCCGGGTTTCGCCGTGCTGACGGAATCTCTTCTTGAAGGTGAAGAGGACAGTCATGGAGTTATCGTGAACAGTTTCGCTGAACTCGACGCCGAGTACACTCAGTATTACGAAAACCTCACAGGAAGAAAAGTGTGGCATGTTGGCCCCAGCTCCCTCATGGTGGAACAAATCGTTAAGAAACCCGCCATTGTTAGCGAGATCAGAAATGAGTGTCTGACGTGGCTTGACTCAAAGGAACAGGACTCGGTTCTCTATATTTGTTTCGGAAGCCTGGTTCTTCTTTCGGACAAGCAGCTTTATGAATTGGCCAAAGGCCTGGATGCCTCCGGGCACTCTTTCATCTGGGTGGTTCACCGGAAAAAGAAAGAAGGACAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGAAGTGGTTGCCAGAGGGGTTTGAGGAGAAGATAGAGAGAGAGAAGAGAGGGATGTTGATAAAGGGATGGGCACCGCAGCCTTTGATCTTGAACCACCCTGCAGTGGGAGGGTTTTTGACGCACTGTGGGTGGAACGCGGTGGTGGAGGCCATCAGTGCTGGGGTTCCGATGGTGACTATGCCGGGGTTTAGTGATCAGTACTACAATGAGAAGCTTATAACGGAGGTGCACAGGTTTGGGGTGGAAGTGGGTGCGGCGGAGTGGAGCATATCGCCGTACGAGGGGAAGAAGACGGTGTTGAGTGGGGAGAGAATAGAGAAGGCTGTGAAAAGGTTGATGGATAAAGGAAATGAAGGTGATAAGATAAGGAAGAAGGCGAAGGAAATGCAAGATAAAGCTTGGAGAGCTGTTCAAGAAGGTGGATCCTCACACAACAATCTCACTGCTCTCATCGATCATCTCAAAGCTCTCTTCCCAGTATCTACCTAA 1452 0.5138 METQGPLKIYFLPFFAQGHQIPMIQLARLVASRGQHITIVTTSANAQLFQKTIDDDIASGHHIRLHLLKFPSTQLGLPEGVENLVSATNNITAGKIHMAAHFIQPQVEAVLKDSPPDVFIPDIIFTWTKDLSKRLQVPRLVFNPISIFDVCMIQAIKAHPEAFLSDSVPYQIPGLPHPLSLPVKPSPGFAVLTESLLEGEEDSHGVIVNSFAELDAEYTQYYENLTGRKVWHVGPSSLMVEQIVKKPAIVSEIRNECLTWLDSKEQDSVLYICFGSLVLLSDKQLYELAKGLDASGHSFIWVVHRKKKEGQEEEEEEEEEEKWLPEGFEEKIEREKRGMLIKGWAPQPLILNHPAVGGFLTHCGWNAVVEAISAGVPMVTMPGFSDQYYNEKLITEVHRFGVEVGAAEWSISPYEGKKTVLSGERIEKAVKRLMDKGNEGDKIRKKAKEMQDKAWRAVQEGGSSHNNLTALIDHLKALFPVST* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0547 483 Gene3D Glycogen Phosphorylase B; 255 459 - -
Vra9g0547 483 ProSitePatterns UDP-glycosyltransferases signature. 344 387 IPR035595 -
Vra9g0547 483 CDD GT1_Gtf-like 7 457 IPR002213 GO:0008194
Vra9g0547 483 Gene3D Glycogen Phosphorylase B; 9 464 - -
Vra9g0547 483 PANTHER GLYCOSYLTRANSFERASE 5 479 - -
Vra9g0547 483 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 475 - -
Vra9g0547 483 PANTHER GLYCOSYLTRANSFERASE 5 479 - -
Vra9g0547 483 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 257 397 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0547 Vra-Chr9 5944801 5946407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0547 7 477 Glycosyltransferase AT2G15480 37.126 3.19e-114 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0547 - K23260 gmx:100793313 746.888