Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0512 ATGGATATTGTGTGGAAAATATTTGATCCAGCAATTGATTTTGTGCGGGATCATGGTATTAATCAGGTGACCTACATTTTTTGTTACACAAAAAATTTTGAGGAACTAAAGAAGAAAGTTAAGCGTCTAGGAGAAGTAAAAGAGAGGTTAGATCGTCAACACGATGAAGCTAAAAGAAAGGGTCACATAGTTGAAGCTACGGTTGAAGAATGGTTTGGGGAAGTGGGCGAATTTGAGAGTAGTGTTGAAAACTACAGCAAAAATGCAGGTCACAAGAAGACAAGGGGTCTCTATTATTTGTTTCCTTACTATAGGCACAAACTGGGCAGACAAGCAAAGAAGATGGAAATAGAGGCTTTGAGGCTAACAGATGAGTCCCCCAAGATTGACGAAGTTTCTCATGCAGAGAAAGTAACATCTTTTGACCTCACTTCATCTAATTCTGGCTACATTGAATTTAATAGTAGAAAATCCATTATGGAAGACATAATGAAAAAACTTAAAGATCCCAATATGAAAATTATTGGACTCCATGGATCACAAGGGATGGGTAAGAGCACTTTAATAAAAAAAATTGCTAATAAAGCTAAATATGAGGGGTTGTTTGATAGAGTGGCTGAAATAGATGTAACTATCAATCCCAATCCCCTTAAAATTCAGGAAGACATTGCATATGTGCTAGGATTGCCACTAGCGGGGGAAAGTGAAAATGTCAGAGCTGATTATCTAAGGAGATGGTTAAGGATAGAAAATGTGAGCATCCTTATAATCTTGGATAACCTTCATGAAAGATTAGACTTGAATAGGTTAGGAATTCCGATTGATGATGATTATGACTTAAGAAAGAAGAATGAGTTGAGCATAAGGTCAAGCAAACAAGGTTCTAACCCAAATCTTAACCGAACACAGGATACAGTCGGCGGCACAAGGGGTACTGACAAAAAAGTTCTAAAAAAAACAAATTTTCTTGCTGATTATAAGGGATGCAAAGTTTTGATTTCTTCATGTTATAAGAAAGTATTTCCTAATGAGATTGATGTTGAGTCAAATTTTTGTTTAAAGGAATTAGATGGCAATGATGCCTTGAAGTTATTTGAGAAGGTGACTGGAGGAGGTGATAAAATGTCTATGCCTAAAGAAGAAATCCAAAACTATTGTACAGGGTTGCCCATGAGAATAGTTACTTTTGCAGTGGCATTTAAAAACTGGAGTGAGTCAGAAAGCGAACCTACACTGGAAAAATTTAAAAAGCAAGGTTTAGTTGAATGGAAGGAGTCTTCGGAGATTCCTAATAAAATAAAATATGACCTTCCAAAAAATAAGGAACTCAAGTTCATTTTCTTGCTTTGTGCTCAAATGGGCCACCTACCCCTGGTTAACGACTTGGTGAAATATTGCTTTGGATTAGGTATACTTGAAGGGGTCTCTTCCCTTAGTGCAGCTCGTGAAAAAATAAATGAAGTGATCCAAGAGTTGAAAAACTTGAGTTTGGTATCCTACGAAAATCCTAATATTCATTTCAGTATGCCTTATATGGTTCGAGATTATGCTCTAAGTAATGCCCTCATTGATAACAATGTTTTTGTTTTCAGAGATGGAAAACTAGATTACTGGCCCAATCTTGAAAAATGCATTTCAATTTCTATATGCAATAGTGACATTATAGATGGGTTTCCTCAAGTCATAAATTGTCCTCAACTTAACTTTTTGCAAATAGAAACTAAGGATCCATCTTTGGAAATACCTGAGAGGTTTTTTAGCAGCATGAAAAACTTGTTAGTTTTAATATTGAGGGGTTTTCACCTATCATGCTTACCATATTCAATTGAAGACCTATTGAACCTCAGAATGCTTTGTTTGGAGCGGTGCACTTTGGATTGCAATTTATCGGTACTGAGAAAGTTTAAAAAATTAAGAATTCTCAGTTTTTCTGGATCTCAACTTAAAAATTTGCCAGTTGAGTTACGATTCTTGAATAAGTTGCGATTGCTAGACATTAGCGATTGTTTTGAACTGAAGACTATTCCACCGAATCTTATATCTAATTTGGCATGTTTGGAAGAGCTATATATAAGAAAAAGCTTGATAACAGAGGAAAGCAAAGGTCAAAATGCATTTCTTTCTGAGCTAATGAATTTGCATCAGTTGAAAGTGGTGGACTTAAGCATCCCGTGTGTTTCAATTATGCCCAATCCCTTATTCTTTGACATGTTAAAAGATTACAAGATTGAAATTGGAGATTTTGAAATGATTTCTGTTGGAGAATATATGATGACCAATAAGTATGAAGAACTCAAAGTATTGGCATTACAGTCGAACGACGACATTGATATTCACTCCCACAAAGGCATAAAATTATTGTTAAAAACAGCAAAAAGTTTGCTCTTGGGAAATGTACGTGTTCAAAATGTTGTTAACGAGTTGAATATAGATGGGTTTCAGGATTTGAAACACTTATCCATCATAAATAACAATGACGTCAAATATCTCAACTCAACAAATTTGTCTAATTGTGTGAACATTTTTCCAAATTTGGAATCTCTATGGCTCTACAATATGATGAACTTAAAGATGATATGTGACGGCCCAATTACACTTGAATCATTTGCCAAATTAAAAACCATCAAGGTTGAGATGTGTTACCAATTGGAAAATCTCTTCTCCTATGCAATTGAAATCTCTACTAGCACAAGATCAAGTGAGATTATTGAATGTAATTCTTACATGAAGAAAGTTTTGGCTAGTTTAGAAATGATTGAGGTTTGTGAATGTGTATCTTTGAAGGAGATCCTTCAAATACCGATGGATTGTAAGAAGGTTAAGTTTCTCAGATTACACACTTTGACACTCCAATCATTGCCATCAATTACTTGTTTTAATGCCAAAGTCAAGACATCTTGCCGGCAACATTCGACAGAGGCTCAAACTACAAATAGAGATCACACAGAAATTTCTGCTGAAGAAGATGACCATAGTGACAATGCGCCTCCTCTTTTTGGTGAACTAGTTGAAGTTCCAAACTTAGAGAATTTGAATTTATCCTCACTCAACATCTGTAAGATATGGAGCGACCAACACTTGTCAAGTTTCTACTTTCAAAACTTGATAAGGTTAGTTGTGAAAGATTGTGATAAATTGACACATCTATGTTCATTATCTATGGCTAGCAGTTTGAAGAGGTTGAAAAGCCTCGTCTTAAGTGGATGTCGTATTATGGAAAATATTTTTGAGATTGAAGGAATTAGTGCAAACAAGGTTTGTGTCTTTCCTAAGCTGGAGGAAATCCACCTTAGCAACATGAAGAGGTTAACAAATATTTGGCAAACTAAAGTTAGTGTTGATTCCTTTTGTAGTCTCATTTCCGTAAGTATCGAAAAATGTAATCAATTGGACAAGATTTTTCCAAGTCATATGGAAGGATGGTTTGAAAGTTTGATTAACTTAAAAGTTTCTAACTGCAAGTCCGTGAAAGAGATTTTTGAAGTTACTTATTATGAAGAAATAGATGAATATGGTGGGATAGACACAAATTTGCAGGTTATTCTTCTTGAAGACCTCCCGAAGTTGAAGGAATTGTGGAGCAAAGATCCACATGGAATTCTAAATTTTAAAAAACTTCGAACTATAGATATAAGTAATTGTGAAGAACTGAGGAATTTGTTTCCAGCTTCTATGGCAAAAGATGTATCAAAGCTTGAACGTATGTCAATATTGCATTGTGAGAGGATGGTGGAAATTGTTTCAAGTAAAGATGCATCAGAAGCTAACAATGATCCATTAGAGTTTCCTGAACTAAGCTATGTGAGATTATATGAGCTTGAAAACATGAAGCAATTCTACAAGGGGAGACATCCAATTAAGTGTCCAAAGTTGAAGGAATTAAGCATAGGCAAGTGTACGAAGCTTAAAACATTTTCACAAGAAACAAGTGATGAAAAGTTTGTTTTCTCCGCTGAAGTGGTATTTCCCAAGTTGGAGTATTTGGAAATTGACTTCGAGGAAGCCCAGAATTTGTTATCCAAGTACCAAATGCAGAATTTAAAAGAGCTTATTATCTTGAGTGCAGTCAATTCCCCAGATCTTTTCTACCCGTTTCTGTACAAAATGCCAAATCTAGAAAAGTTAAAATTGACTTTCAATCCTTTTTATAAATCGATAGAGTCACTGCGAAGTACAAACATTGGGCAGCATGACAGATTGGGAGTCGTATTAAAGTTGAAGCAATTGTTTATTCGTTCCTCTAATATAAAAGATCTGGGATTTGACCGAGACCAAGTTCTACAGAGACTGGAGCTTTTGAGCTTAAAATATTGCTACGGATTGAACACTTTAGCTCCTTCCTCTGTATCGTTGAGTTACTTGACATGTTTGAAAGTAAAGAATTGTATGGGATTAAGGAATTTAATGGCATCCTCCACGGCCAAAAGCATGGTTCAACTTAAGACTATGAAAGTAATCAACTGTTATGATATAGAGGAAATAGTAAGCAATGAAGAGACTGAAGAAGGGAAAGTGATGAAAATTGTATTCAGCAAATTGATTTCTATAGAACTCGTGGGGCTAAAGAACATGGCAAGCTTTTGCAGTTACAAGGAGTGTGAATTTGAATTTCCATCACTGGAAATATTGATTATAAGAGGATGCCCAAAGATGGAGAAATTCAGTGAAAAAAGAGCAATAGCAGCAAAGTTGAAAGATGTATTTGATGTGGAAGGAGATCAAAAAGCCAAATGGCAGTGGAGAGGTGACTTGAATGCCACCATACAAAAGGTTTTCAATGATAAGCAAGTATGGGATGACACTCATTGGAGGCAGCAAAACAAGTTTGGGTATTTGAAAAGGTTGAGTGTATGGGGATGTCATACTCTAAAGCATATAATTCCATCTCATTTGCTTTCTTGCTTTCACAATTTGGAAGAGTTAAAAGTATGGAAGTGCAAAAACGCAGAGGTGATATTTAAAATGAATGATGAGAACAGGGTGATGACAAAACCTTCCGGAATATTCCGTCTGAAAACATTGTCTTTAAGTTTCCTAGCAAAACTGAAGCATGTATGGGAGAAGGATCCGGAGGGAATTATTGGCCTTCAACTGCTAAAGGAAATGCATGTTCAATATTGTAAGAGTGTTAAAAGTTTGTTTCCAGCATCGGTAGCCAAAGATCTTACGAGACTTGAAGTGCTTGAGGTAACTGAGTGTGAAGAATTGGCAGAAATATTTAAGAAGGATGAAAAGGATGAGGAAAGAACCACACAAGAATTTGTGTTTCGTGATCTCACCTCATTGACACTAGAAGAATTGCCAGCCCTCAAATACTCTATACACTGCTCCAAACAACAGGTAATTCTCAAAACTTTGCCTTTACGTGGCCATTCAAAAGTTATTTAA 5388 0.3569 MDIVWKIFDPAIDFVRDHGINQVTYIFCYTKNFEELKKKVKRLGEVKERLDRQHDEAKRKGHIVEATVEEWFGEVGEFESSVENYSKNAGHKKTRGLYYLFPYYRHKLGRQAKKMEIEALRLTDESPKIDEVSHAEKVTSFDLTSSNSGYIEFNSRKSIMEDIMKKLKDPNMKIIGLHGSQGMGKSTLIKKIANKAKYEGLFDRVAEIDVTINPNPLKIQEDIAYVLGLPLAGESENVRADYLRRWLRIENVSILIILDNLHERLDLNRLGIPIDDDYDLRKKNELSIRSSKQGSNPNLNRTQDTVGGTRGTDKKVLKKTNFLADYKGCKVLISSCYKKVFPNEIDVESNFCLKELDGNDALKLFEKVTGGGDKMSMPKEEIQNYCTGLPMRIVTFAVAFKNWSESESEPTLEKFKKQGLVEWKESSEIPNKIKYDLPKNKELKFIFLLCAQMGHLPLVNDLVKYCFGLGILEGVSSLSAAREKINEVIQELKNLSLVSYENPNIHFSMPYMVRDYALSNALIDNNVFVFRDGKLDYWPNLEKCISISICNSDIIDGFPQVINCPQLNFLQIETKDPSLEIPERFFSSMKNLLVLILRGFHLSCLPYSIEDLLNLRMLCLERCTLDCNLSVLRKFKKLRILSFSGSQLKNLPVELRFLNKLRLLDISDCFELKTIPPNLISNLACLEELYIRKSLITEESKGQNAFLSELMNLHQLKVVDLSIPCVSIMPNPLFFDMLKDYKIEIGDFEMISVGEYMMTNKYEELKVLALQSNDDIDIHSHKGIKLLLKTAKSLLLGNVRVQNVVNELNIDGFQDLKHLSIINNNDVKYLNSTNLSNCVNIFPNLESLWLYNMMNLKMICDGPITLESFAKLKTIKVEMCYQLENLFSYAIEISTSTRSSEIIECNSYMKKVLASLEMIEVCECVSLKEILQIPMDCKKVKFLRLHTLTLQSLPSITCFNAKVKTSCRQHSTEAQTTNRDHTEISAEEDDHSDNAPPLFGELVEVPNLENLNLSSLNICKIWSDQHLSSFYFQNLIRLVVKDCDKLTHLCSLSMASSLKRLKSLVLSGCRIMENIFEIEGISANKVCVFPKLEEIHLSNMKRLTNIWQTKVSVDSFCSLISVSIEKCNQLDKIFPSHMEGWFESLINLKVSNCKSVKEIFEVTYYEEIDEYGGIDTNLQVILLEDLPKLKELWSKDPHGILNFKKLRTIDISNCEELRNLFPASMAKDVSKLERMSILHCERMVEIVSSKDASEANNDPLEFPELSYVRLYELENMKQFYKGRHPIKCPKLKELSIGKCTKLKTFSQETSDEKFVFSAEVVFPKLEYLEIDFEEAQNLLSKYQMQNLKELIILSAVNSPDLFYPFLYKMPNLEKLKLTFNPFYKSIESLRSTNIGQHDRLGVVLKLKQLFIRSSNIKDLGFDRDQVLQRLELLSLKYCYGLNTLAPSSVSLSYLTCLKVKNCMGLRNLMASSTAKSMVQLKTMKVINCYDIEEIVSNEETEEGKVMKIVFSKLISIELVGLKNMASFCSYKECEFEFPSLEILIIRGCPKMEKFSEKRAIAAKLKDVFDVEGDQKAKWQWRGDLNATIQKVFNDKQVWDDTHWRQQNKFGYLKRLSVWGCHTLKHIIPSHLLSCFHNLEELKVWKCKNAEVIFKMNDENRVMTKPSGIFRLKTLSLSFLAKLKHVWEKDPEGIIGLQLLKEMHVQYCKSVKSLFPASVAKDLTRLEVLEVTECEELAEIFKKDEKDEERTTQEFVFRDLTSLTLEELPALKYSIHCSKQQVILKTLPLRGHSKVI* 1796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0512 1795 Gene3D Ribonuclease Inhibitor 945 1164 IPR032675 -
Vra9g0512 1795 Gene3D Ribonuclease Inhibitor 1176 1317 IPR032675 -
Vra9g0512 1795 SUPERFAMILY RNI-like 1609 1733 - -
Vra9g0512 1795 MobiDBLite consensus disorder prediction 970 991 - -
Vra9g0512 1795 SUPERFAMILY L domain-like 1287 1556 - -
Vra9g0512 1795 SUPERFAMILY L domain-like 537 1221 - -
Vra9g0512 1795 Coils Coil 1325 1345 - -
Vra9g0512 1795 MobiDBLite consensus disorder prediction 289 309 - -
Vra9g0512 1795 MobiDBLite consensus disorder prediction 289 312 - -
Vra9g0512 1795 Pfam NB-ARC domain 158 276 IPR002182 GO:0043531
Vra9g0512 1795 PANTHER RPP4C4 5 1780 - -
Vra9g0512 1795 PANTHER - 5 1780 - -
Vra9g0512 1795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 450 IPR027417 -
Vra9g0512 1795 Gene3D - 135 348 IPR027417 -
Vra9g0512 1795 PRINTS Disease resistance protein signature 174 189 - -
Vra9g0512 1795 PRINTS Disease resistance protein signature 248 262 - -
Vra9g0512 1795 PRINTS Disease resistance protein signature 386 400 - -
Vra9g0512 1795 PRINTS Disease resistance protein signature 656 672 - -
Vra9g0512 1795 Coils Coil 475 498 - -
Vra9g0512 1795 SMART AAA_5 171 361 IPR003593 -
Vra9g0512 1795 Gene3D Ribonuclease Inhibitor 1364 1790 IPR032675 -
Vra9g0512 1795 MobiDBLite consensus disorder prediction 974 991 - -
Vra9g0512 1795 Gene3D Ribonuclease Inhibitor 538 944 IPR032675 -
Vra9g0512 1795 Coils Coil 105 125 - -
Vra9g0512 1795 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0512 Vra-Chr9 5394233 5401012 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0512 - - vra:106773145 2975.27