Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0506 ATGGTAGATAGGGAGCAAGCAAGACCCTTGGCCCCAGCAATAGAGCGACCAAGCAGTGAAGAACATGACTCCTCTCTTCACCCCAAAACACAAGCTCACAAAAAACTCATCAAACGATGTGCTTGCCCATTGATCTCTCTACTTCTCCTAGCAATACTCATCATAGTTTTGATCTTCACAGTATTTCGTGTCAAGGACCCTGTGATCACCATGAACGGGGTCAGGATCACAAAGCTAGAACTTTCCAACACCATGACCCTTCAAACCAGGGCCAACATGTCCCTAGTGGCAGATGTGTCAGTGAAAAACCCCAACGTTGCATCATTTAGGTATAGCAACACGACAACCAGTTTATACTATCGTGGTGTCATGGTGGGGGAGGCAAGAGGACCACCTGGGAGGGCAAAGGCTAGAAGAACAATACGGATGAATGTAACCATTGATGTTATCACCGATCGGGTGGTTTCTAGCCCGGATTTTACGACGGATCTGGGTTCCGGGTTGATGACTATGAGTAGCTTCTCTAGAGTTCCCGGGCAGGTGAAGATCTTGAACTTGTTCAAGAGACATGTTGTTGTAAAAATGAACTGCTCCACCACTTTTAATATTTCAACACAGGCTATTAAGGAGCAGAGTTGTATACGGAAGGTTAAACTTTAG 660 0.4576 MVDREQARPLAPAIERPSSEEHDSSLHPKTQAHKKLIKRCACPLISLLLLAILIIVLIFTVFRVKDPVITMNGVRITKLELSNTMTLQTRANMSLVADVSVKNPNVASFRYSNTTTSLYYRGVMVGEARGPPGRAKARRTIRMNVTIDVITDRVVSSPDFTTDLGSGLMTMSSFSRVPGQVKILNLFKRHVVVKMNCSTTFNISTQAIKEQSCIRKVKL* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0506 219 Gene3D - 55 206 - -
Vra9g0506 219 MobiDBLite consensus disorder prediction 1 27 - -
Vra9g0506 219 SUPERFAMILY LEA14-like 48 156 - -
Vra9g0506 219 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 19 218 - -
Vra9g0506 219 Pfam Late embryogenesis abundant protein 99 198 IPR004864 -
Vra9g0506 219 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 19 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0506 Vra-Chr9 5352322 5353351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0506 - - gmx:100799820 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0506 9 5352322 5353351 Vra9g0506 9 5352322 5353351 ECH