Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0504 ATGAAATCTTTCGATATTCACAGTCCTGAAGATAAGGGAATGACAAAACAGAATGTTAATACTAAGTTAAAAAAGTGGAGAAGTGTTTACTATTTTATCTTTATACTGGGTGCTCTTGCTCTTCTCCTCTCTGTTACGGCCATGTCCAAGTTTCTCTCTTTTAAATCATTTCTCGGTACTGAGTCTTTATACTCAAATCTGAATCCTGAGGGGAATGAAAATGAAGTGATGATGATAACTGTTGAAATTGTGATTCAGAAAATTGAAGAGCAAATGGAAAAACTGAGGGAAACAAAACAGGATCCATCATCATCATCATTTGCATTCCAGCAAGCTTCATTTCTTGCTGATATATTAGGACTTCTTGAGTCAGCAGCGACGTCTCATCAACACAATAAAGGGAATAATCAGCAAAATGATAGCTTCACCAGTCATCCTTTGGTGAGAAGAAAGAAACGATCAGATGAACCAGCTGATTACTTTCTGCGAGAAGAGATTCGGAAGTATGTCAGGATCAAGCCTAACAGATTAGGAAAACAAAATTTTATGGGTGCTAATGCAAGCTTCACCAGCATAGGCCATGCGTGCTTTGCCATGAAGGAAGAGCTTGAAGAATACATGGATTATGATGTTGGAGAGATCTGCAATGATGATTGGAAACTGGCTCAAAAGCTCATGGTTCATGGCTGTGATCCTTTACCAAGGAGAAGGTGCTTTTCAAGGGCCCCTAAGCTATACAACCAACCATTTCCCATCACTGAATCATTGTGGAAACTCCCTGATGATAGAAATGTTAGATGGAGTCAATACCGGTGCAAGAACTTTGCCTGTCTCGCTGGCAACACCACTGGTAAGGGATTCTTCAAGTGTGCACACTGCTTCAATCTCACCAGCCATGAGATGCCTAGATGGATGAGCCTGGAATCTGATTCAAACCAGACAGCCGATTTCCTTATATCAGATGTTCTTGCAATTAAGCCAGGAGAGATCAGAATGGGATTGGACTTCAGTGTTGGAACTGGGACTTTTGCTGCTAGGATGAGGGAATTCAATGTGACAATAGTTTCTGCCACAATCAATTTTGGAGCACCCTTCAATGAAATGATAGCTCTGAGAGGACTTGTTCCTCTCTACTTGACTATTAATCAGAGGCTTCCATTTTTTGACAACACCCTGGATTTGATTCACACAACTAGGTTTCTTGATGGATGGATTGATTTTGTGCTCCTTGAGTTCATATTGTATGACTGGGACAGAGTTCTGAGGCCAGGGGGTTTGCTTTGGATTGACAGTTTTTTCTGCTTGAAAGAAGATTTGTATGATTACTTGAAGGCCTTCGAAATACTGAGATATAAGAAACTCAAATGGGTGGTTGCTCCAAAGCTTGATAAAGATGATCAAGAAATGTTCTTTTCTGCTGTTTTAGAGAAGCCTCCTAGGCCATTCAGGTGA 1452 0.4056 MKSFDIHSPEDKGMTKQNVNTKLKKWRSVYYFIFILGALALLLSVTAMSKFLSFKSFLGTESLYSNLNPEGNENEVMMITVEIVIQKIEEQMEKLRETKQDPSSSSFAFQQASFLADILGLLESAATSHQHNKGNNQQNDSFTSHPLVRRKKRSDEPADYFLREEIRKYVRIKPNRLGKQNFMGANASFTSIGHACFAMKEELEEYMDYDVGEICNDDWKLAQKLMVHGCDPLPRRRCFSRAPKLYNQPFPITESLWKLPDDRNVRWSQYRCKNFACLAGNTTGKGFFKCAHCFNLTSHEMPRWMSLESDSNQTADFLISDVLAIKPGEIRMGLDFSVGTGTFAARMREFNVTIVSATINFGAPFNEMIALRGLVPLYLTINQRLPFFDNTLDLIHTTRFLDGWIDFVLLEFILYDWDRVLRPGGLLWIDSFFCLKEDLYDYLKAFEILRYKKLKWVVAPKLDKDDQEMFFSAVLEKPPRPFR* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0504 483 Coils Coil 78 101 - -
Vra9g0504 483 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 323 431 IPR004159 GO:0008168
Vra9g0504 483 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 18 482 - -
Vra9g0504 483 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 311 451 IPR029063 -
Vra9g0504 483 MobiDBLite consensus disorder prediction 129 154 - -
Vra9g0504 483 Gene3D Vaccinia Virus protein VP39 303 461 IPR029063 -
Vra9g0504 483 MobiDBLite consensus disorder prediction 129 144 - -
Vra9g0504 483 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 18 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0504 Vra-Chr9 5346656 5349591 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0504 - - var:108346439 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0504 9 5346656 5349591 Vra9g0504 9 5346656 5349591 ECH