Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0499 ATGGCCCTTCTAATTCACTCCCCGGAAATATCTGTTGCTCTCCAAATTGCTCCAAACCCTAACCCTAGGCTGAGCAAAGTCCACAGCTTCAAACCCCACACAAAGAGCACAAAGATTGGGTCAGCGCGCGGAGTGAGAATTGCTTGCAAATTGAAAGATTTTGCAATTCTGGATTTGGGTTTGGATGAGAACGTGAATTCGTACGGTCAATTTTCGGTTCATGTGAAGCCAGAGTCGAAGCAGAGCAAAGAGAAAGAAGAAGAAGAGAAGCAGAATTACCATGTTAATGTGGGATATGCTATTAGAACTTTGAGGGAGGATTTCCCTGATCTGTTCTACAGGGAACTTAGCTTTGACATCTACAGGGATGATATTGTGTTTAAGGATCCAATGAACACGTTCATTGGAATTGAGAATTACAAATCTATCTTCTGGGGACTACGATTCCATGGCAGGATATTTTTCAAAGCTTTGTGGGTTGACATAATTAGTGTATGGCAGCCTGTTGAGAACGTCATCATGGTTCGCTGGACTGTTCATGGTATCCCACGAGTTCTATGGGAAAGCCGTGGTAGGTTTGATGGAACCTCTGAGTATAAACTTGACAAGCAGGGCAAGATTTTTGAACACAGGGTTGACAACATTGCTACCAACTCACCTCCTCGGTTCAAAGTGTTTAGTGTAGCAGAGTTAATTCAATCTATTGGCTGCCCCTCAACTGCAAGACCTACCTATTTTGAAACATCTTCACATCCCGAGAGAACGTAA 768 0.4323 MALLIHSPEISVALQIAPNPNPRLSKVHSFKPHTKSTKIGSARGVRIACKLKDFAILDLGLDENVNSYGQFSVHVKPESKQSKEKEEEEKQNYHVNVGYAIRTLREDFPDLFYRELSFDIYRDDIVFKDPMNTFIGIENYKSIFWGLRFHGRIFFKALWVDIISVWQPVENVIMVRWTVHGIPRVLWESRGRFDGTSEYKLDKQGKIFEHRVDNIATNSPPRFKVFSVAELIQSIGCPSTARPTYFETSSHPERT* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0499 255 Pfam Uncharacterized conserved protein (DUF2358) 100 210 IPR018790 -
Vra9g0499 255 PANTHER RIKEN CDNA 2310061I04 GENE 39 251 IPR018790 -
Vra9g0499 255 SUPERFAMILY NTF2-like 116 212 IPR032710 -
Vra9g0499 255 PANTHER - 39 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0499 Vra-Chr9 5261713 5264904 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0499 - - vra:106773181 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0499 9 5261713 5264904 Vra9g0499 9 5261713 5264904 ECH