Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0495 ATGGCGGGAGACACATCATGGATAAGCCACTTCGATGATGGTGCACGTAGGGAGACTAGGGAGTTTGATTCAGTTTTGGAATTTGGTGAGGAAGTTGACACAGAGGGAAGTGCTGTTTCTGTGAACACAGTGTTACCTGATGAATTGGTGGAGCGAATCCTAGCCTATCTCCCCGTTGTAAGCATTTTCAGAGCAAGTTCTGTGTGTAAAAGATGGCATGAGATTATTACTTCTGAAAGGTTTCAATGGAACCCTTCAAATTCATTGCCTCAGAGACCTTGGTACTTTATGTTCACCTACTCAGATGAACCAACTGGTTATGCTTATGATCCCATTCTTCGGAAATGGTATGGCATTGAGCTTCCTTTCATTGAAACATCTAGTTGGTTCGTTGTTTCTTCTTATGGTTTAGTCTGCTTCATGGACAATGACAGCAGAAGCAAATTATGCATGTGCAACCCTATTACCAAAAGGTGCAGAAGGCTTGAAGGTCCTCCCGGTCTGAAATTTTCTGATTACAGTGCATTGGCAATGTCAGTGAACAGGAAATCCCACAGTTACACTCTGGCAATTGTGAAATCAAAACAAATCCCTGAGGATTTTGTTCAGTGGGAGATCTCAATTCATATATACCGCTCAGAGAAAGAGACCTGGATGACAACTGCAACAGAGGTTTTGATGGGGTGGAGAGGTGGTAATGAGAGTGTGATATGCAATGGTGTGTTATACTTTTTAGTCTACTTAGCTGGGGGTGTTCCTTCAGAAAGTAGGCATGCACTGGTTGCATATAATATTTCTAATCTCACTTCTCAACCTACCATGAGAAGGAGTTTTATTGCTGCACCCTGTTCACTAACATGTGGCCGATTGATGAATATGAAGGAAAAACTTGTAATGGTGGGAGGAATTGGTAAGCAGGATAGACCTGACATAATAAAAGGAATTGGCATATGGGTTCTTAATGATAGGAAGTGGGAAGAGATTGTACGAATGCCCCATAGATACTTCCAAGGCTTTGGGGAGTTTGATGATGTTTTTGCTAGCAGTGGTACTGATGATCAAATATATATCCAAAGTTATGGATCTCCAGCACTCCTCACATTTGATTTGAACCTTAGACAATGGAAATGGTCACAGAAATGCCCTGTATCAAAGAGGTTCCCTCTACAGCTATTCACTGGTTTTTGCTTTGAGCCTAGGCTTGAAATTGCTCCATAG 1218 0.4187 MAGDTSWISHFDDGARRETREFDSVLEFGEEVDTEGSAVSVNTVLPDELVERILAYLPVVSIFRASSVCKRWHEIITSERFQWNPSNSLPQRPWYFMFTYSDEPTGYAYDPILRKWYGIELPFIETSSWFVVSSYGLVCFMDNDSRSKLCMCNPITKRCRRLEGPPGLKFSDYSALAMSVNRKSHSYTLAIVKSKQIPEDFVQWEISIHIYRSEKETWMTTATEVLMGWRGGNESVICNGVLYFLVYLAGGVPSESRHALVAYNISNLTSQPTMRRSFIAAPCSLTCGRLMNMKEKLVMVGGIGKQDRPDIIKGIGIWVLNDRKWEEIVRMPHRYFQGFGEFDDVFASSGTDDQIYIQSYGSPALLTFDLNLRQWKWSQKCPVSKRFPLQLFTGFCFEPRLEIAP* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0495 405 PANTHER F-BOX FAMILY PROTEIN 1 404 IPR045048 -
Vra9g0495 405 SUPERFAMILY F-box domain 43 144 IPR036047 GO:0005515
Vra9g0495 405 SUPERFAMILY Galactose oxidase, central domain 68 384 IPR011043 -
Vra9g0495 405 Gene3D - 86 388 IPR015915 GO:0005515
Vra9g0495 405 PANTHER OS02G0260200 PROTEIN 1 404 - -
Vra9g0495 405 TIGRFAM F_box_assoc_1: F-box protein interaction domain 135 333 IPR017451 -
Vra9g0495 405 SMART fbox_2 45 85 IPR001810 GO:0005515
Vra9g0495 405 Pfam F-box domain 45 81 IPR001810 GO:0005515
Vra9g0495 405 Gene3D - 36 84 - -
Vra9g0495 405 ProSiteProfiles F-box domain profile. 39 86 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0495 Vra-Chr9 5144511 5147536 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0495 - - gmx:100817678 652.129