Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0490 ATGAAAGATTCGAATACGGATCTATTTGACCCGGTTGTGGCCATGGAATCCGACTGGTCTCGCGCTGGTTCCACCTCCGACGCCGATTTCGCCTTCGCCTTCAACGACAGCAATTTCTCCGACAGGGTTCTTCGGATCGAGATCATGGCTGACCCTGCTGACGCCGGACCCGATTCCGACGGTTGCGCCACCATTGCCGATTGGGCGCGCCACCGCAAGCGTCGCCGTGAGGATATCAGAAAGGACACAGGCACGGAACCTGCTGCTGTGCCAGACGAGCACATTTTGAACGGGAATCAACCTGATGTGGATGAGCGTGAAAACCAAGATGAGGAGGCTGTTGCAATGGTTGAAGAACCTCATTCTGGTGATGAAGCTACAAATAGTCATGATTCGGACTGGAGCATGGACTGCTCTGCAGGTGCCGTTGTTAGAGTTAAAACGCTGCACATAAGTTCTCCTATCTTGGCTGCTAAAAGTCCTTTCTTTTATAAGCTTTTCTCAAATGGGATGAGGGAGTCTGAGCAGAGACATGTCTCCCTCAGAATTAATGCCTCAGAAGAAGCTGCTCTCATGGAGCTGCTGAACTTTATGTACAGTAATACCTTGACCACTACTACAGCACCTGCTTTGCTGGACGTGTTGATGGCTGCTGACAAATTCGAGGTTGCTTCTTGCATGAGATACTGTAGCCGGTTATTGCGGAACATGCCTATGACACCTGACTCTGCTTTGCTTTATCTGGAGCTTCCATCTAGTGTCTTAATGGCCGATGCAGTCCAACCATTGACTGATGCTGCAAAGCAGTATCTGGCTGGTCGATACAAGGATATAACCAAGTTCCAGGAAGAGGTCATGGCCTTGCCCCTAGCTGGAGTAGAGGCAATACTGTCTAGCGATGATCTCCAGGTTGCATCAGAAGATGCTGTATATGATTTTGTGTTGAAGTGGTCTCGACAGCAGTACCCTAAACTGGAAGAAAGGCGAGAAGTCTTGGGTGCTCATCTTGCTCGTTTAATTCGCTTCCCTTACATGACCTGCCGAAAGCTTAAGAAGGTATTAACCTGTTCTGACTTCGACCATGATGTTGCATCCAAGCTTGTACTGGAGGGCCTATTTTTCAAGGCTGAAGCTCCACACCGCCAACGGGCACTGGCAGCGGAAGACTCTGCTTCTTCAAACCGTAGATTTGTGGAGAGGGCATATAAGTACCGACCGGTGAAGGTGGTTGAATTCGAACTTCCCCGGCAGCAGTGTGTGGTGTACTTGGATCTGAAGAGGGAGGAGTGCGCCAATCTATTTCCATCTGGGCGGGTATATTCTCAGGCATTCCATTTGGGTGGTCAAGGTTTTTTCCTATCAGCACATTGTAACATGGATCAACAAAGCTCTTTCCATTGCTTTGGGCTGTTTTTGGGAATGCAGGAGAAGGGGTCAGTGAGCTTTGCTGTTGACTATGAGTTTGCTGCAAGGTCTAGGCCAACAGAAGAATTCGTTAGCAAGTACAAAGGTAACTACATGTTCACAGGGGGAAAGGCCGTTGGGTATAGAAACTTGTTTGCTATTCCATGGACATCGTTTATGGCTGAGGATAGTCTTTACTTCATCAATGGTGTCCTCCATCTTAGAGCTGAGCTCACCATCAGGCACTGA 1653 0.4882 MKDSNTDLFDPVVAMESDWSRAGSTSDADFAFAFNDSNFSDRVLRIEIMADPADAGPDSDGCATIADWARHRKRRREDIRKDTGTEPAAVPDEHILNGNQPDVDERENQDEEAVAMVEEPHSGDEATNSHDSDWSMDCSAGAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESEQRHVSLRINASEEAALMELLNFMYSNTLTTTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPDSALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDITKFQEEVMALPLAGVEAILSSDDLQVASEDAVYDFVLKWSRQQYPKLEERREVLGAHLARLIRFPYMTCRKLKKVLTCSDFDHDVASKLVLEGLFFKAEAPHRQRALAAEDSASSNRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYMFTGGKAVGYRNLFAIPWTSFMAEDSLYFINGVLHLRAELTIRH* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0490 550 SMART BACK_2 253 355 IPR011705 -
Vra9g0490 550 Pfam BTB/POZ domain 145 235 IPR000210 GO:0005515
Vra9g0490 550 Gene3D - 270 375 - -
Vra9g0490 550 Gene3D Potassium Channel Kv1.1; Chain A 127 258 IPR011333 -
Vra9g0490 550 SMART BTB_4 138 238 IPR000210 GO:0005515
Vra9g0490 550 MobiDBLite consensus disorder prediction 73 88 - -
Vra9g0490 550 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 6 550 - -
Vra9g0490 550 CDD BTB_POZ_ZBTB_KLHL-like 143 221 - -
Vra9g0490 550 Pfam BTB And C-terminal Kelch 261 353 IPR011705 -
Vra9g0490 550 MobiDBLite consensus disorder prediction 73 113 - -
Vra9g0490 550 SUPERFAMILY POZ domain 147 235 IPR011333 -
Vra9g0490 550 ProSiteProfiles BTB domain profile. 138 207 IPR000210 GO:0005515
Vra9g0490 550 PANTHER OS02G0260700 PROTEIN 6 550 IPR045890 -
Vra9g0490 550 SUPERFAMILY TRAF domain-like 437 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0490 Vra-Chr9 5038824 5042804 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0490 - - gmx:100776595 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0490 9 5038824 5042804 Vra9g0490 9 5038824 5042804 ECH