Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0482 ATGGCAGCGGCGGCGGCAGTGACGGTGCTACTCCCACCTAGGATTCCGACCACCACCAACGTTACCCGCTGTTCTGCTTTGCCTTCTCTGCCTCCACGTGTAACCAGCACCACCTTGTTCTCACCTTCCCTCAACCACTTTTCAGTGTCCCGAAAATCTTTTCTGCTTCAGACCAGAGCTTCTTCAGAGGAATCATCCTCGGTAGATGCCAATGAGTTGTTCACAGATTTGAAGGAAAAGTGGGATGCTGTTGAAAACAAGTCCACAGTGCTTATCTATGGTGGTGGGGCTTTAGTTGCTGTTTGGCTATCTTCCATTCTCGTGAGCGCAGTCAACTCAGTTCCCTTGCTTCCAAAGATCTTGGAGTTGGTAGGTCTAGGATACTCTGGATGGTTTGTCTACCGATACCTTCTGTTCAAGTCTAGCAGGAAGGAGCTAGCTACAGACATTGAGGGACTGAAGAAGAAAATTACTGGAACTGAATAG 486 0.4877 MAAAAAVTVLLPPRIPTTTNVTRCSALPSLPPRVTSTTLFSPSLNHFSVSRKSFLLQTRASSEESSSVDANELFTDLKEKWDAVENKSTVLIYGGGALVAVWLSSILVSAVNSVPLLPKILELVGLGYSGWFVYRYLLFKSSRKELATDIEGLKKKITGTE* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0482 161 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 76 159 IPR025564 -
Vra9g0482 161 PANTHER - 3 161 IPR033344 GO:0009579
Vra9g0482 161 PANTHER MEMBRANE PHOSPHOPROTEIN 14 KDA, CHLOROPLAST, PUTATIVE-RELATED 3 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0482 Vra-Chr9 4883350 4885891 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0482 - - gmx:100305578 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0482 9 4883350 4885891 Vra9g0482 9 4883350 4885891 ECH