Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0480 ATGGGTACCCTTAAGGTGTCCTACAGTTCATGCACATTTTCAAAATTCTTGGTAATTTGCATGGTGGCATTTTCTTTGGTTGGTTCAAGTTATGGTGACTGTGATTTTAAGGCAATCTTCAATTTTGGGGATTCAAATTCGGATACTGGTGGGTTTCATGCAGCCTTTCCTGCACAGCCTGATCCCTATGGAATGACCTTTTTCAAAAAACCAGTTGGTCGTGCTTCTGATGGAAGGCTCATTCTTGATTTTCTTGCTCAGGGTCTAGGGCTTCCATTTTTGAGTCCATATCTTGAGTCTATTGGATCAGACTATAGCCATGGAGCTAACTTTGCATCTTCAGCTTCTACTGTGATTCCTCCCTTTACTTCCTTCTTTCATAGTGGACTCAGTCCATTTTCCCTTTCCATTCAACTCAGCCAAATGAGACAATTCAAAGCCAGAGTTGATGAATTTCATAAAACAGGAACTATACCATCATCTGGTCTTCCTTCACCAGATATATTCAAAAAGGCCATTTACATGTTATACATTGGCCAAAATGATCTCACTTCCAAAATAGCAGCCACCGGTAGTATTAATGGAGTCATGGACACCTTTCCTCAAATTGTTTCACAAATTAATGATGCTGTCAAGGAGCTTTATGCACAAGGGGCACGCACAATTATGGTGTTCAATCTTGGTCCTGTGGGATGTTATCCAGGATATTTGGTGCAGCTTCCTCATGCTCCTTCTGATTTTGATGAGTTTGGATGCATGGTTTCTTACCAGAATGTTGTAAATTATTACAACAAATTGTTGAAGGAGACAATGAGCCAAACCAGACAAAGTTTAGCAGATGTTTCCCTCATTCATGTAGACACTTACTCTGCTTTGTCGGAGCTCTTTCACCATCCCACACTTTATGGGTTTAAGTATGGTACTAAAACATGTTGTGGATATGGAGGGGGTGACCACAACTATAACCCTAAAATTTTGTGTGGTAATATGCTAGCAAGTGCTTGTGCTGAACCCCGAGAATACGTGAGTTGGGATGGAATCCATTTCACAGAAGCAGCAAACAAGATTGTTGCAAATGCTATTCTAAATGGTTCTCTTTTTGACCCCCCTTTCCCTCTCCGTGAACATTGTGATCTAAAACCTATTGTTTGA 1152 0.4062 MGTLKVSYSSCTFSKFLVICMVAFSLVGSSYGDCDFKAIFNFGDSNSDTGGFHAAFPAQPDPYGMTFFKKPVGRASDGRLILDFLAQGLGLPFLSPYLESIGSDYSHGANFASSASTVIPPFTSFFHSGLSPFSLSIQLSQMRQFKARVDEFHKTGTIPSSGLPSPDIFKKAIYMLYIGQNDLTSKIAATGSINGVMDTFPQIVSQINDAVKELYAQGARTIMVFNLGPVGCYPGYLVQLPHAPSDFDEFGCMVSYQNVVNYYNKLLKETMSQTRQSLADVSLIHVDTYSALSELFHHPTLYGFKYGTKTCCGYGGGDHNYNPKILCGNMLASACAEPREYVSWDGIHFTEAANKIVANAILNGSLFDPPFPLREHCDLKPIV* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0480 383 CDD SGNH_plant_lipase_like 38 365 IPR035669 -
Vra9g0480 383 Pfam GDSL-like Lipase/Acylhydrolase 39 361 IPR001087 GO:0016788
Vra9g0480 383 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 381 - -
Vra9g0480 383 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 7 381 - -
Vra9g0480 383 Gene3D SGNH hydrolase 30 365 IPR036514 -
Vra9g0480 383 SUPERFAMILY SGNH hydrolase 39 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0480 Vra-Chr9 4876617 4879117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0480 38 372 Acyl Lipid Metabolism Gene Families AT4G10950 27.507 2.20e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0480 - - gmx:100775514 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0480 9 4876617 4879117 Vra9g0480 9 4876617 4879117 ECH