Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0369 ATGGATTCAAATTCAACAAAGGAGAAGCTGCAGAACATTGATGCTGTTGCAGATGAAGCCGACCTTAAGTCTTGCTATATGCAGAAGTTCAGGCTGTATGAGACTCTCTCGAAATTTTACATGATCGGAAGAGACAAAAACAGAACATTTTGGAGGGTCTTAAAGATTGACAGATTGGAACCATCTGAATTGAATATCGTTGAAGATTCAGCAATATACTCAGAAATTGAGTGTTGTGACCTTCTGAGGCGGGTACATGAAGGAAACAAGTCTACAGGAGGGCTTAAATTTGTAACAACTTGCTATGGAATCATTGGATTTATCAAATTTCTTGAACCATATTACATGCTGCTTATAACGAAGCGAAGGAAGATTGGCACAATCTGTGGTCACAATATATATGCTATCACAAAGAGCGAAATGGTTCCAATTCCACATTCTACCGTGCGATCCAAAATGGCTTATTCTAAGGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTGCGAAGGACTTCTTTTTCAGCTACTCCTACAATGTTATGTTTAGTCTTCAACGCAACTTATCTGATCATAATACTACAGGGCAATCGCTATATGATACCCTTTTTGTTTGGAATGAGTTCTTGACTCGTGGAATCAGGAATAATCTCCAGAATACTTCATGGACTGTAGCCTTAGTACATGGCTTTTTTAAACAGGTCAAACTTTCCATATCAGACAGTGAGTTCAACTTGACTATCATTGCTAGGCGCTCACGGCATTATGCTGGGACCAGATATTTGAAACGAGGAGTTAATGAAAAGGGTAGAGTAGCTAATGATGTTGAGACAGAGCAGATAGTCTTTACAGAAGCTCGTGATGGACACCCTATGCAAATCAGTTCTGTGGTGCAGAACAGGGGTTCAATCCCTCTTTTCTGGTCTCAGGAAACCTCTAGATTGAATATAAAACCGGACATTATATTATCAAGAAAGGACTCTACTTTTGAGGCCACAAGACTTCATTTTGATAATCTTGTCAAAAGATATGGAAAGCCAATTATTATTCTGAACTTGATAAAGACACGTGAGAAGAGGCCTCGAGAAACTATTCTGCGAGCCGAGTTTGCAAATGCTGTTAGGTATATTAATAAAAGTTTGAGAGGGGAAGATCGCTTGAGGTTCCTTCATTGGGATCTGCATCGGCATTCAAGATGCAAAGCTACTAATGTATTGGGACAGCTGGGAAAAGTGGCTGCATATGCGCTGAAGCTGACAGGCATCTTCTACTCTCCAGTGACACCAAATATGAGGCTAGATGGATTATCCCAATATTCCTACTCTGAGAATAACAATGTCATTGATCACTGTATCACAGAAGAAGCCAGCATAAATAAGAATAATGTTGATACAGAAACAGAAACTAGCAACTGTTATTATAGGGATGATGAGAACAAAGATTACGGTGTCAAACCCCAGATGCTTCAATCCGGGGTGTTGAGGACTAACTGCATAGACTGTTTAGATCGTACCAATGTTGCTCAATATGCTTATGGACTAGCTGCACTTGGACGTCAGCTTCAAGTTTTAGGATTTATTGAATCCCCACATATTGATCTTGATAACCCTTTGGCTGGGGAATTAATGGAAGTCTATGAGTCCATGGGAGACACATTAGCCTTTCAATATGGGGGTTCTGCAGCACACAACAAGATATTTTCTGAAAGAAGAGGTCAATGGAAGGCAGCAACACAGTCCCAGGAATTTATTCGAACCCTACAACGTTATTACAATAACACATATGTAGATGGTGATAAACAAAAAGCAATTAACTTATTCTTGGGTCATTTTCAGCCGCAACAGGGAAAACCAGCACTGTGGGAGCTTGATTCAGATCAGCATTACGCTGTCAAGAGACATGGCCTTTATTTAACAGATGGCAGCGTTAGGTCAACTATTACGAGATCTCTATCAGATGGTAACATTCTCGGTGAAAGTGATGCTTCCATTAGGAACTTGAATGATACAAATTGTCAGAAATCATCTGAAAAACCTGATAAGCATTTCCGTTCGGGATCTACGCCGGATATCTTTGTTTGTGGAAGTGATATTTGTCATTGCAGGCAGATATACGGAGGAGTGGTCAAGGGTAAAAATTGTGAGAGTGGTCATATTTGTTACGATGAACATGGTGATGCATGTGACTGCTCCAATTTCCTTGATGTGGACTGGCTTTCTTCTTCTGGAAATTCCTGTGAAGAGGAGTTACTTGAAAGGTCAACCAGCATCTCCTCGGAGAATATCGCAAATGAACTAGTAACCACTGAAACATCTGCTAGTGAATCTGGATCCAGCCTTAAGGGAAGGCAGAGTGCAGAAGAACTGAACAAAGATAGGAAGTACAGTGAAAGGTTTGAACGTTGGGTAAATGAAGGAGAGATGCATTTGCATTTTGCTTGA 2448 0.4036 MDSNSTKEKLQNIDAVADEADLKSCYMQKFRLYETLSKFYMIGRDKNRTFWRVLKIDRLEPSELNIVEDSAIYSEIECCDLLRRVHEGNKSTGGLKFVTTCYGIIGFIKFLEPYYMLLITKRRKIGTICGHNIYAITKSEMVPIPHSTVRSKMAYSKDENRYKKLLCSVDLAKDFFFSYSYNVMFSLQRNLSDHNTTGQSLYDTLFVWNEFLTRGIRNNLQNTSWTVALVHGFFKQVKLSISDSEFNLTIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFTEARDGHPMQISSVVQNRGSIPLFWSQETSRLNIKPDIILSRKDSTFEATRLHFDNLVKRYGKPIIILNLIKTREKRPRETILRAEFANAVRYINKSLRGEDRLRFLHWDLHRHSRCKATNVLGQLGKVAAYALKLTGIFYSPVTPNMRLDGLSQYSYSENNNVIDHCITEEASINKNNVDTETETSNCYYRDDENKDYGVKPQMLQSGVLRTNCIDCLDRTNVAQYAYGLAALGRQLQVLGFIESPHIDLDNPLAGELMEVYESMGDTLAFQYGGSAAHNKIFSERRGQWKAATQSQEFIRTLQRYYNNTYVDGDKQKAINLFLGHFQPQQGKPALWELDSDQHYAVKRHGLYLTDGSVRSTITRSLSDGNILGESDASIRNLNDTNCQKSSEKPDKHFRSGSTPDIFVCGSDICHCRQIYGGVVKGKNCESGHICYDEHGDACDCSNFLDVDWLSSSGNSCEEELLERSTSISSENIANELVTTETSASESGSSLKGRQSAEELNKDRKYSERFERWVNEGEMHLHFA* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0369 815 ProSiteProfiles Sac phosphatase domain profile. 166 561 IPR002013 GO:0016791
Vra9g0369 815 MobiDBLite consensus disorder prediction 770 786 - -
Vra9g0369 815 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC4 1 810 - -
Vra9g0369 815 MobiDBLite consensus disorder prediction 770 789 - -
Vra9g0369 815 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 1 810 IPR043573 GO:0043813|GO:0046856
Vra9g0369 815 Pfam SacI homology domain 102 400 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0369 Vra-Chr9 3087660 3098815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0369 27 813 Acyl Lipid Metabolism Gene Families AT5G20840 55.936 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0369 K22913 - gmx:100806380 1458.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0369 9 3087660 3098815 Vra9g0369 9 3087660 3098815 ECH