Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0351 ATGGAAGAAGAAATGGCGATGGACTCTTCTCCGAATCCCGGTGATAGTTTCTTCGACCCTCAGAATCTCTCTTCGCGACAGCAGTTCCGCAGATATGGGAAGAGGCACTCAACTTCAGGTGCTTCAATCCAACTGGACAACTCGGCTTCCAAGTTGAGTGAAACTGGGTTGTTATATGATGGCCAAAGCATCCATAGTCCTACTAATGCAGCACTTGTTCTTGAAAATATTAAACAAGAGGTTGAGAGTTATGATGCTGATTACTTGGAAGAGAAGACACCATATTCCACTAGGAGGAGGTTGTCCACTGACGTTCCTGGTGTTCCTGGTGTGGATGCTGGTTTTGATTCTGTTCGCTACTCATTAAAGGCTTGTAAGACAGAGGGTGACACATTGGGAGATGGTGTGGACACAATATTTACTTTGTTTGCATCTCTGCTTGATTCTTCATTACAAGGACTGATGCCTATTGCTGATTTGATACTAAGAGTCGAGAATGCATGTCGAAATGTTTCAGAGTCTATAAGGTATGGTTTGAATGTAAGGCATCGTGTTGTTGAAGACAAGTTGATGAGGCAGAAGGCTCAACTTTTGCTTGATGAGGCGGCAACATGGTCTCTCTTGTGGTTCCTCTATGGGAAAGTGACTGAAGAACTATCTAAAGATCAAATACTGGTGTCGGGAACCTCACATGTGGTGGCTTGTGAGTTTGTTGTGGAGGATCATACAGCTCAATTATGCCTTCGGATAGTCCAGTGGTTAGAAGGTTTAGCTTCTAAAGCACTTGACTTGGAAGCGAAGGTGCGTGGATCTCATGTGGGTAGTTATCTCCCTAACTGTGGAGTTTGGCATCATACTCAGCGTTACCTGAAGAAAAGAACTCTTGACATGAATGTTGTTCATCACTTGGACTTTGATGCCCCAACTCGTGAAAATGCTAATCTTTTACCTGATGACAAGAAACAAGATGAATCTCTTCTAGAAGATGTGTGGACTCTTTTAAGGGCTGGAAGGCTAGAAGAGGCTTGTGGACTTTGCCGGTCTGCTGGACAGCCATGGAGAGCTTCTTCTCTTTACCCATTTGGAGGATTGAACCAGTTTCCTTCTGTTGAAGTTCTGGTCAAGAATGGTAAAAATAGAACTTTGCAAGCTGTTGAGTTTGAAAGTGGTATTGGTCATCAGTGGCATCTTTGGAAATGGGCTTCATATTGTGCATCAGAGAAAATAGCAGAGCAAGGGGGGAAATGTGAAGCAGCTGTATATGCAGCCCAGTGTAGCAACCTTAAACGGATGCTTCCACTCTGCAATGACTGGGAGTCAGCATGCTGGGCAATGGCAAAGTCTTGGCTAGATGTGCAAGTGGACTTGGAAATCACTCGCTCACAGCCAGGGGGAGTTGATCAACTTAGAACATTTGGAGATGTAATTGATGGAAGCCCTGGACGTGCCGATGGTTCTTTTGAGCCTTCTAATGGACCTGAAAATTGGCCAATTCAAGTTTTGAATCAACAACCTCGACAGCTCTCATCTCTTCTTCAAAAACTTCATTCTGGGGAAATGATCCATGAGTCTGTTACTAGACAATGCAAGGAGCAACAACGTCAAATTCAGATGACTTTAATGCTAGGGGACATACCACGCGTACTAGACCTTATATGGTCATGGATAGCTCCTACTGAAGATAATCAGAATGTATTTAGGCCGTGTGGAGATCCTCAAATGATACGATTTGGTGCACATCTGGTCCTTGTGCTTCGATATTTATTAGCCGAGGAAATGAAGGACACCTTCAAGGACAAAATTCTAAGTGTTGGCGATAATATTTTGCATTTGAAAACATTGTTGAGTGAAAATTTGCTTTGCTATATTCATTTATTGGAATGGAAAAACATTAGGTATGCCCTATTTCTCTTTTCAAAGGAGCATGAAGAGTTGGTGGGCATATATGCTTCTCAGCTTGCATGTCACCGTTGCATTGATCTCTTTGTACACATGATGGAGCTTAGGCTGCACAGCAGTGTACATGTCAAATACAAGATATTCCTTTCTGCTATGGAATATTTACCATTTTCTTCTCTGGATGATTCCAAGGGAAATTTTGAAGACATTATTGAGAGAATTTTGTTGAGATCCCGAGAGATCAAGGTTGGCAAATACGATAACCTGTCAGATGTTGCAGAACAACACAGACTGCAGAGTCTTCAGAAAGCTAAAGTTATCCAATGGCTTTGCTTTACACCACCATCAACAATTACAAATGTCAAAGATGTCAGTAAAAAGCTTCTTCTTCGAGCACTGGTTCATAGCAACATACTCTTCAGGGAGTTTGCTTTGATTTCTATGTGGAGAGTGCCAGCAATGCCGATAGGTGCCCACACAGTACTTGGCTTTCTTGCTGAACCTTTAAAACAGCTTGCTGAAACTCTTGAGACCTCTGAGGATTATAATGTTTTTGAGGACCTGAGGGAGTTCCAAGACTGGCGTGAGTATTACTCTTGTGATGCAACCTATCGGAATTGGCTTAAAATTGAAGTGGAGAATGCAGAGGTTCCTGTCACTGAACTATCATTGGAGGAAAAGGAAAGGTCCATTTCAGCTGCCAAGGAAACACTGAATGCATCCCTTTCACTCCTACAAAGAAAAGAAACACCTTGGTTGGTTTCAACTGATCGTATGTATGAATCAGTTGAACCAGTTTTCCTTGAACTTCATGCAACAGCAATGCTCTGCCTGCCATCTGGAGAGTGTTTGTGTCCAGATGCTACTGTTTGTACTACACTTACGAGTGCTCTCTATTCTTCAGCTGGTGATGAGGTCGTCTTAAATCGACAATTAATGGTTAATGTTTCTATATCTTCAAGGGACAGTTATTGTGTTGATGTTGTTCTTCGCTGCATAGCTATTGCTGGTGATGGACTTGAACCACATGAGCTCAATGATGGTGGTATTCTTGGCACCATCCTGGCTTCTGGTTTCAAAGGTGAGCTTCCTCGGTTTCAAGCTGGAGTTACAATGGAGATATCCCGTTTGGATGCTTGGTATTCTGACAAAGATGGCAACTTAGAGTGTCCGGCAACCTACATAGTGAAAGGACTTTGTCGGAGGTGCTGCCTTCCAGAAGTCATTCTTCGTTGCATGCAAGTCTCTGTTTCTCTAATGGGGTCCGGAGTCCTGCCTGACTGTCATGATACTTTGATAGAGCTGGTTGGCAGTCCGGAAACTGACTTTCTTCACTTGTTTAGTCAACAACAATTACAGGAGTTTTTATTGTTCGAGAGGGAATACTCAATCTGCAAAATGGAAATTACAGAGGAATGA 3318 0.428 MEEEMAMDSSPNPGDSFFDPQNLSSRQQFRRYGKRHSTSGASIQLDNSASKLSETGLLYDGQSIHSPTNAALVLENIKQEVESYDADYLEEKTPYSTRRRLSTDVPGVPGVDAGFDSVRYSLKACKTEGDTLGDGVDTIFTLFASLLDSSLQGLMPIADLILRVENACRNVSESIRYGLNVRHRVVEDKLMRQKAQLLLDEAATWSLLWFLYGKVTEELSKDQILVSGTSHVVACEFVVEDHTAQLCLRIVQWLEGLASKALDLEAKVRGSHVGSYLPNCGVWHHTQRYLKKRTLDMNVVHHLDFDAPTRENANLLPDDKKQDESLLEDVWTLLRAGRLEEACGLCRSAGQPWRASSLYPFGGLNQFPSVEVLVKNGKNRTLQAVEFESGIGHQWHLWKWASYCASEKIAEQGGKCEAAVYAAQCSNLKRMLPLCNDWESACWAMAKSWLDVQVDLEITRSQPGGVDQLRTFGDVIDGSPGRADGSFEPSNGPENWPIQVLNQQPRQLSSLLQKLHSGEMIHESVTRQCKEQQRQIQMTLMLGDIPRVLDLIWSWIAPTEDNQNVFRPCGDPQMIRFGAHLVLVLRYLLAEEMKDTFKDKILSVGDNILHLKTLLSENLLCYIHLLEWKNIRYALFLFSKEHEELVGIYASQLACHRCIDLFVHMMELRLHSSVHVKYKIFLSAMEYLPFSSLDDSKGNFEDIIERILLRSREIKVGKYDNLSDVAEQHRLQSLQKAKVIQWLCFTPPSTITNVKDVSKKLLLRALVHSNILFREFALISMWRVPAMPIGAHTVLGFLAEPLKQLAETLETSEDYNVFEDLREFQDWREYYSCDATYRNWLKIEVENAEVPVTELSLEEKERSISAAKETLNASLSLLQRKETPWLVSTDRMYESVEPVFLELHATAMLCLPSGECLCPDATVCTTLTSALYSSAGDEVVLNRQLMVNVSISSRDSYCVDVVLRCIAIAGDGLEPHELNDGGILGTILASGFKGELPRFQAGVTMEISRLDAWYSDKDGNLECPATYIVKGLCRRCCLPEVILRCMQVSVSLMGSGVLPDCHDTLIELVGSPETDFLHLFSQQQLQEFLLFEREYSICKMEITEE* 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0351 1105 MobiDBLite consensus disorder prediction 14 45 - -
Vra9g0351 1105 PANTHER NUP107-RELATED 4 1104 IPR007252 GO:0005643|GO:0017056
Vra9g0351 1105 Gene3D - 283 432 - -
Vra9g0351 1105 PANTHER NUCLEAR PORE COMPLEX PROTEIN 4 1104 - -
Vra9g0351 1105 Pfam Nuclear pore protein 84 / 107 198 891 IPR007252 GO:0005643|GO:0017056
Vra9g0351 1105 ProSitePatterns Zinc finger C2H2 type domain signature. 655 675 IPR013087 -
Vra9g0351 1105 Gene3D - 725 919 - -
Vra9g0351 1105 MobiDBLite consensus disorder prediction 1 45 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0351 K14301 - gmx:100786552 2056.57