Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0350 ATGAGTATCTTGCAAGGGAAACGCAAGCGCCAAGACCTGGCTTCTGCACTCTCTGCGTCGATGACGAACGAGGAGCGGTTGATTTACAATATCATTCGCGGAAAGAAGGAGATGGGGATATGGCAAGGGGACATCAAAAGAGAAACCAACATCCCTGACAGCATTTTGAAGAAATCCATCAAGTTGCTAATCTCCAAGACTCTTATCAAAGAAGTTGTGAACATCCAAAACAAGTCCAAGAAGGTGTTGATGGCCATGGAATTCGAGCCCTCTAAGGAGATCACTGGTGGAGAGTGGTATACCGAAGGCAGGCTCGACACACAGCTCATTGATGCTCTGTCTGATGTCTGCTTGAAGCTTATTTCCCGGAAAAAGATCGCTACCCGCGATGCAATCCTCGAGTGGACTAGAACCTTAGGAAGTGAGGTTTTTCCTGGTGGAGTAAGTCCAGGACAGGTGGAACAAATTCTGAAAGTTTTGGTTATGGAAAATAAGTTACAAGAGGTGAACAGCACTGGCTTTGGGGATTTTTCATCTGTTCCTGCTGGTGAAGTTTGTTTTAGGTTGGTGAAAAAGGTAGGCACCAATGTTAAAGTTGGTGCCATGGCTTCTATTCCTTGCGGGGTTTGTCCTAGGATTCAATTTTGTACACCCAATGTCAGCTTGCTGGGCAATGGCAAAGTCTTGGCTAGATGTGCAAGTGGACTTGGAAATCACTCGTTCACAGCCAGGGGGGAATTGATCAACATTTGGATATGTAATTGA 765 0.4562 MSILQGKRKRQDLASALSASMTNEERLIYNIIRGKKEMGIWQGDIKRETNIPDSILKKSIKLLISKTLIKEVVNIQNKSKKVLMAMEFEPSKEITGGEWYTEGRLDTQLIDALSDVCLKLISRKKIATRDAILEWTRTLGSEVFPGGVSPGQVEQILKVLVMENKLQEVNSTGFGDFSSVPAGEVCFRLVKKVGTNVKVGAMASIPCGVCPRIQFCTPNVSLLGNGKVLARCASGLGNHSFTARGELINIWICN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0350 254 SUPERFAMILY "Winged helix" DNA-binding domain 18 87 IPR036390 -
Vra9g0350 254 Gene3D - 3 80 IPR036388 -
Vra9g0350 254 PANTHER RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED 7 219 IPR016049 -
Vra9g0350 254 Pfam RNA polymerase Rpc34 subunit 18 130 IPR007832 GO:0005666|GO:0006383
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0350 Vra-Chr9 2932615 2936953 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0350 K03025 - gmx:100789276 301.212