Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0339 ATGGCAACTGCAACCATGGCTACTGCAGCAGGTGCAGCTGCCCTTCTGTATTACACATTGAATCGGAAATTGCAAACTCAGGATGCGATAGATGAAGATGTTGAAGAAAATGGAAGTGAAACGACCACTGATACGCCATTAGGCAGTGCTCGTGTTTCTCATCCGTTAATCCAAGCCCCTGGAACCTGGTTAGAGACAATTTCAACGTTGTCTGAGACTCTCAGGTTCACGTATTCGGAGACGCTTGGGAAATGGCCAATTGGGGACTTGGCGTTTGGTATCAGCTTTCTGCTCAAGAGGCAGGGGAACTATCAAGTTGACAGTGAATTCTGTGGGAAGGATAGTGTACAGCTGAAAGGATCTGAGATTACTGCCGAACTTAAGTATCTCTTGAACTTGTTGACCCTGTGCTGGCATTTTTCAAAGAAGCCCTTTCCCTTGTTTTTAGAAGAAACTGGCTACACTGAAGAAAATGTTCTCCTTCGGGAAGCCAAAGCAGGAATTTTGAAACCAGCTTTTACAATAATCGTTGATCATGACATGAGATGCCTTTTGCTGTTGATTCGTGGCACACATAGTATCAAAGATACTCTAACAGCTGTTACAGGAAATGTGGTGCCATTCCATCACACTGTTGTTCACCAAGGTGGGGTTAGAGATTTGGTTTTAGGTTATGCCCACTGTGGAATGGTTGCTGCTGCTAGATGGATTTCAAAGCTTGTAACTCCTTGTCTCCTTGAAGCACTTGGCCACTACCCTGATTATAAAGTCAAGATTGTTGGGCACTCTTTGGGTGGAGGTACTGCAGCAATTCTAACTTATGTGTTGAGAGAGAGAAAGGAACTTTCTGTCGCCACATGTGTTACATTTGCTCCAGCTGCGTGTATGACATGGGAGTTGGCAGAGTCGGGTGATAGTTTTATCACTTCTATTATAAATGGAGCTGATTTGGTGCCTACATTCTCAGCTGCTTCTGTAGATGACTTGCGTTCTGAGGTGACAGCATCAGCATGGATAAATGACTTGAGGAATCAAATTGAACAGACAAGAATACTTAGTACAGTCTATCGCTCTGCTTCAGCATTAGGTTCTCGACTCCCATCGATTGCCACTGCTAGAGCAAAAGTTGCTGGGGCTGGGGCCATTTTGCAGCCAGTTTCTAATGGTACCCAGGTTGTGATGAAGAGAGCCAAGAGTATGGCAGCATGGGCACGTCCAAACCTTAATTTGTCCTCTTGGTCATGCATGGGACCCCGTCGCAGAGCCTTGAGTGCATATTCAAACTCCAAAGACGGGGATAGTCCTCCTACATCTTCCTCTACCAATATCGACGGTTCCGATTCATTTCTTCGTTCTCCCAAGAAGGCGATTAATGCAAAGAATATGAACCTTCCTGTATCTTCATCTATAGAAGAGTGGTCTTCTGAGATTGAATGTGGCAATGAAAGTAGTTCTGATACTGAGGTGGATGTTGATCATGGTGACCGTCAGAACCTGATGGACCATGACAGATATGATGATCAGATGAGTGAAGTGGAGTTGTGGCATCAACTGGAGAATGAGCTGTATGACGGTCCTGAAGTTGAGGAGACTGATGTTGTAAAGGAGATAAGGGAAGAGGAAGCAACCCACGAAGTAGAGGAAGCCCAGAGTTCAGTACCAGAAACGAAAGAAGTCTACAGATTTTTCCCTCCAGGAAAAATAATGCACATTGTTACACTCCATTCTGACACGGAGCATGAAAATGATGATAGCCCAACCTATGCAAGTTCAGACAGTAGCGAGCTAGATGAGACTAAGATTGGGATTTTTCTAACTTCCAGGTCTCTGTATAGTAAACTTAGACTCTCACAGAGAATGATCAGTGATCACTTCATGCCAGTTTATAGAAGGCAGATTGAAAGGCTAATAAAAGAACTTGAGCAGGAAGCTAATGAGGATCATGATACACAAGAGGTGGTGTTATAG 1968 0.4426 MATATMATAAGAAALLYYTLNRKLQTQDAIDEDVEENGSETTTDTPLGSARVSHPLIQAPGTWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLKRQGNYQVDSEFCGKDSVQLKGSEITAELKYLLNLLTLCWHFSKKPFPLFLEETGYTEENVLLREAKAGILKPAFTIIVDHDMRCLLLLIRGTHSIKDTLTAVTGNVVPFHHTVVHQGGVRDLVLGYAHCGMVAAARWISKLVTPCLLEALGHYPDYKVKIVGHSLGGGTAAILTYVLRERKELSVATCVTFAPAACMTWELAESGDSFITSIINGADLVPTFSAASVDDLRSEVTASAWINDLRNQIEQTRILSTVYRSASALGSRLPSIATARAKVAGAGAILQPVSNGTQVVMKRAKSMAAWARPNLNLSSWSCMGPRRRALSAYSNSKDGDSPPTSSSTNIDGSDSFLRSPKKAINAKNMNLPVSSSIEEWSSEIECGNESSSDTEVDVDHGDRQNLMDHDRYDDQMSEVELWHQLENELYDGPEVEETDVVKEIREEEATHEVEEAQSSVPETKEVYRFFPPGKIMHIVTLHSDTEHENDDSPTYASSDSSELDETKIGIFLTSRSLYSKLRLSQRMISDHFMPVYRRQIERLIKELEQEANEDHDTQEVVL* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0339 655 Pfam Lipase 3 N-terminal region 51 130 IPR005592 GO:0016042
Vra9g0339 655 MobiDBLite consensus disorder prediction 425 449 - -
Vra9g0339 655 Pfam Lipase (class 3) 186 323 IPR002921 GO:0006629
Vra9g0339 655 Coils Coil 626 650 - -
Vra9g0339 655 SUPERFAMILY alpha/beta-Hydrolases 146 323 IPR029058 -
Vra9g0339 655 MobiDBLite consensus disorder prediction 427 448 - -
Vra9g0339 655 CDD Lipase_3 177 322 - -
Vra9g0339 655 Gene3D alpha/beta hydrolase 148 359 IPR029058 -
Vra9g0339 655 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 643 - -
Vra9g0339 655 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0339 Vra-Chr9 2808077 2814001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0339 15 643 Acyl Lipid Metabolism Gene Families AT3G14075 63.707 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0339 - - gsj:114390808 1102.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0339 9 2808077 2814001 Vra9g0339 9 2808077 2814001 ECH