Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0318 ATGGCGGAAAGCACATCACCGTCGTCCAAACCCTCACCAATGGATCCTCAAAACCCCGCACCATCCTCCAACCCTACAATCCCTTCCCCTTCCCACAACAAAACAGCTTCACCCTCGCTCCCTCTGCTCCCCCAAGACCAGCAACAGCAGCAACAGTTTAACTCGCTCTCCTCGAGGAGAAACAGGGATAATTGTGAAGGAAGCCCATCACATAACAGTGAACTGAGGACAATGTCTGCTGAATCGCCAAGTTCTGTTCGTAAAGTGGTTGTTCATCTCAGAGCCACCGGTGATGCTCCTATTCTCAAGCAATCCAAGTTCAAGATAGCAGGAACTGATAAATTCGTTAAAGTGATAGACTTTCTCCGACGGCAGCTCCACAGGGAGACATTGTTTGTTTATGTCAATAGTGCTTTTTCACCAAACCCCGATGAATTGGTCATTGATCTATTTAATAATTTTGGTTTTGATGGCAAACTGGTTGTCAACTACGCTTGTTCCATGGCGTGGGGCTAA 516 0.4709 MAESTSPSSKPSPMDPQNPAPSSNPTIPSPSHNKTASPSLPLLPQDQQQQQQFNSLSSRRNRDNCEGSPSHNSELRTMSAESPSSVRKVVVHLRATGDAPILKQSKFKIAGTDKFVKVIDFLRRQLHRETLFVYVNSAFSPNPDELVIDLFNNFGFDGKLVVNYACSMAWG* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0318 171 PANTHER UBIQUITIN-LIKE PROTEIN ATG12B 78 171 - -
Vra9g0318 171 Gene3D - 82 171 - -
Vra9g0318 171 MobiDBLite consensus disorder prediction 27 63 - -
Vra9g0318 171 CDD Ubl_ATG12 88 170 - -
Vra9g0318 171 PANTHER AUTOPHAGY PROTEIN 12 78 171 IPR007242 GO:0000045|GO:0005737
Vra9g0318 171 Pfam Ubiquitin-like autophagy protein Apg12 88 171 IPR007242 GO:0000045|GO:0005737
Vra9g0318 171 MobiDBLite consensus disorder prediction 1 81 - -
Vra9g0318 171 MobiDBLite consensus disorder prediction 12 26 - -
Vra9g0318 171 SUPERFAMILY Ubiquitin-like 87 170 IPR029071 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0318 K08336 - gmx:100527905 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0318 9 2561287 2567222 Vra9g0318 9 2561287 2567222 ECH