Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0314 ATGGGTTCTCGAGGAAGGCCATTATTTGATCTCAATGAACCGCCTGCAGAGGATAATGATGATAGAGATGGTATTGTCTGCATCCAGCCCCAAAAGACACACCCATCGACAAATCCCCATGCTTCTGATTTATTTGCAACATCAACTGCATCCCAAGGAATAATAAATAATCATGCTTTTTCACATGCCTCATCTGTCTCTGGATTTCAACCTTTTGTTCGGCCCAAATCCTCTGGTGTGCCTGAATCAGATGCTGAATTGAAGAGAGCAGGAGATCAGGACACAAAGGTTTCCTCAAAGTCAAGTAAAGATGAAGATGTGAAGGTTACAGATTCACGGATTCAAAGTTCAACAAATGCCCAACCTACTGAGAGGGAAGAAGGGGAATGGTCTGATGAGGACGTGTTTGCTAATGCAAATGGAGGTAATAATGCTAATGCAAATGGAGGTAATAATGCTAATGCAAATGGAGGTAATAATGCTAATGCAAATGTAGGGAATAATTTGCCACAGCGAAGTCAAGCTTCAGAAGAGGTAGCAGAATCTGGAATGGTGGATGGGGGTGTTGTGGTTGCTTTTGACGATAAGCCTAGAAATCTTAAGAGTTCTGATAGTATAAATGATGAAAAGGGTAGTCATGCTTCTATAGGTCTAGAATCAAATTCGAGTGAGCAGAAAAGCAATAGTATTCCAAATTCAGAAAGCAATATAAAAAGCGAAACCTCTAATGATGCACTGGAGGAACCTGCTTTAGTTCCCAAGCAAAAAGAAGTGAAAGGTATTGAAGCAAGTCATGCGCTTAGGTGTGCAAATAATCCAGGGAAGAGGAAGATTGACCAACGTAAAGAGGAAATGTTGGGAAAGAAACGTAATAGACAGACAGTGTTTCTTAACTTAGAGGATGTTAAGCAAGCAGGTCCTATTAAAACCTCAACCCCTAGAAGGCAGAATTTCTCGTCATCTGTTGTAAGTCGTACAATAAAGGAAGTCCGCACTATTCCTGCACAAGTTGAGCGTGTTGGAATAGCTAAGGATCAGAAGCTCACTGAGACTACTTCTGGTGAAGGTGGCAACCATGCTGAAGCACACGAACCTAAATCTGATTGTAATGGCGATACTACTGGACCACTTGTTAGATCCAGGAGGTTAAACAGTGAGACAGAGCCTCCTGCAGAGGCCAATTTACCACCCATTCCAAGACAGGGCTCATGGAAACAATTGACAGATTCAAGGCAGCAGAAAAACACTCTCCATTCTAATAGGAAGTTGGGATTGAGTGGTCAAAGTTCCAATGATGTTAAGTTAGGAAACAAGAAACATCTTTCTATCAAGAAGCAGACTCCTATCAGCAACCAGTCCCAGGACACATCTGTTGAACGTCTTATACGGGAGGTGACCAGTGAAAAGTTTTGGCATCACCCAGAGGATACTGAGCTTCAGTGTGTTCCTGGACGGTTTGAATCAGTGGAAGAGTATGTTAGAGTATTTGAGCCTTTGCTTTTTGAGGAATGCCGTGCTCAACTTTACAGTACTTGGGAAGAGTCAACAGAAACAGTGTCAAGGGATACTCATATTATGGTGCGAGTGAAGGCGAATGAGTCGAGGGAAAGAGGATGGTATGATGTTAAAGTTCTTCCAGTACATGAGTTCAAATGGTCATTTAAGGAGGGTGATGTTGCAATTCTTTCATCCCCCAGGCCTGGATCAGTTAGATCCAAGCAGAACAATTCATCTGTAGCTCAGGATGACGGTGAATCAGAAGTCACTGGACGAGTGGTTGGTACGGTTAGGCGTCACATACCTATTGATACCCGTGATCCTCCTGGTGCTATTCTTCATTATTATGTTGGAGACTCTTATGATCCAAGCAGGGTTGACGATGACCATATCATAAGAAAGCTTCTAAGTGGAAGCATCTGGTACCTCACCGTTCTTGGTTCTCTTGCCACCACGCAAAGGGAGTATGTTGCCCTACATGCATTTCGTCGACTAAATTTGCAGATGCAAAGTGCAATCCTTCAACCTAGTCCCGAACACTTCCCTAAATACGAGCAACAGACCCCAGCCATGCCCGAATGCTTCACACAGAATTTTGTTGAGTATCTACGTAGGACCTTCAATGAACCCCAGTTGGCTGCAATCCAATGGGCTGCCACCCACACAGCTGCTGGCACAAGTAGTGGATCAACAAAAAGGCAAGAACCTTGGCCATTTACCCTCGTTCAAGGACCTCCAGGAACAGGAAAAACACATACAGTGTGGGGAATGTTGAATGTCATTCACCTTGTTCAGTATCAGCACTACTACACCTCTTTACTAAAACATGTGGCCCCTGAGAGCTACAAGCAAGTCAATGAGATTAATTCAGATAATGTCCCCACTGGATCTATTGATGAAGTTCTTCAAAACATGGACCAGAATCTCTTGCGAACCTTACCTAAACTGGTCCCAAAACCTAGAATGTTAGTCTGTGCTCCATCTAATGCTGCCACTGATGAGCTTCTTGCTCGTGTTCTGGATCGTGGATTTATTGATGGGGAGATGAAAGTTTATCGACCAGATGTGGCTCGAGTAGGGGTTGATTCTCAGACACGTGCTGCCCAAGCAGTTTCTGTTGAACGTAGAACTGAACAGCTTTTAATCAAGAGTCGGGAAGAAATTATGGGATGGATGCACCAGTTAAAGAATCGTGAGGCACAGCTGACTCAGCAGTTGCATTGTCTCCACAGAGATCTTAATGCTGCTGCTGCTGCTGTTCGTTCCCAAGGATCTGTTGGTGTTGATCCTGACCTTCTCATGGCCCGAGATCAGAATCGAGATGCTTTGCTACAGAGCCTTGCTGCTGTGGTTGAAAACCGGGACAAGGTTTTGGTTGAGATGTCTCGCCTAGCCCTTCTTGAAAGTAGGTTTCGACCTGGTAGTGGATTTAATTTGGAAGAAGCCCGTGCTAGTTTGGAGGCCAGTTTTGCAAACGAAGCAGAGATTGTTTTCACTACAGTTTCTAGCAGTGGCCGGAAGTTGTTTTCTCGCCTTTCCCATGGTTTTGATATGGTGGTCATTGATGAGGCAGCCCAAGCCAGCGAAGTGGCAATTCTGCCTCCCCTCTCTCTCGGTGCAGCTCGATGTGTTCTTGTTGGAGATCCTCAGCAGCTTCCTGCTACAGTTATAAGCAAGGCTGCTGGAACATTGATGTACAGTAGGAGTCTTTTTGAAAGGTTCCAGCAAGCAGGTTGCCCGACAATGTTGCTGTCTGTTCAGTATAGAATGCACCCTCATATTCGGGATTTCCCTTCTAGGTACTTCTATCAGGGGCGCCTTACCGATAGTGAAAGTGTGGCTAAACTGCCTGACGAGCCATACTACAAGGACCCTTTACTTAAACCTTACTTATTCTATGATATCAGACACGGGCGCGAGTCTCACAGAGGTGGATCAGTCTCTTATCAAAATATACATGAAGCACAATTTTGTCTCAGATTGTACGAGCATGTTCAGAAAACAGTCAAGTCTCTGGGTCTAGGAAAAATTACTGTTGGCATAATTACTCCATATAAGCTGCAATTGAAATGCCTCCAGCGTGAGTTTGACGAAGTCTTAAATTCAGAAGAAGGGAAGGATCTATATATCAATACAGTAGATGCTTTCCAAGGTCAAGAACGAGATGTCATTATAATGTCCTGTGTGCGTGCATCTAGTCACGGTGTTGGTTTTGTTGCAGATATTCGTCGGATGAATGTTGCCCTTACACGTGCAAGAAGGGCCCTTTGGGTCATGGGAAATGCGAATGCTCTGGTGCAATCAGAAGATTGGGCTGCATTGATTAATGATGCTAAATCTCGAAATTGCTATATGGACATGGACTCTCTTCCTAAAGACTTCCTGGTGTCCAAGGGACCTGTTTACACATCATTACCCGGTAAGCCTTCATCAAATATGAGGGGCATGAGATCAGGTGGACCAAGATATAGATCAATGGATATGCATATGATGGAGTCCAGGTCGGGAGCACCATCTGAAGATGACGAGAATATGGGTGCTCCAATTGGCTCGAGAAATGGGAACCATCGCCAATCACGGTTTTCAATGGAGAACAACGTAGATGATTTTGATCACGGGGGTGACAAATCCAGAGATGCTTGGCAGTATGGTATACAGAAGAAGCAGAACTCATCTGGACCCATGGGAAAGAGAGACGTATAA 4200 0.4436 MGSRGRPLFDLNEPPAEDNDDRDGIVCIQPQKTHPSTNPHASDLFATSTASQGIINNHAFSHASSVSGFQPFVRPKSSGVPESDAELKRAGDQDTKVSSKSSKDEDVKVTDSRIQSSTNAQPTEREEGEWSDEDVFANANGGNNANANGGNNANANGGNNANANVGNNLPQRSQASEEVAESGMVDGGVVVAFDDKPRNLKSSDSINDEKGSHASIGLESNSSEQKSNSIPNSESNIKSETSNDALEEPALVPKQKEVKGIEASHALRCANNPGKRKIDQRKEEMLGKKRNRQTVFLNLEDVKQAGPIKTSTPRRQNFSSSVVSRTIKEVRTIPAQVERVGIAKDQKLTETTSGEGGNHAEAHEPKSDCNGDTTGPLVRSRRLNSETEPPAEANLPPIPRQGSWKQLTDSRQQKNTLHSNRKLGLSGQSSNDVKLGNKKHLSIKKQTPISNQSQDTSVERLIREVTSEKFWHHPEDTELQCVPGRFESVEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPVHEFKWSFKEGDVAILSSPRPGSVRSKQNNSSVAQDDGESEVTGRVVGTVRRHIPIDTRDPPGAILHYYVGDSYDPSRVDDDHIIRKLLSGSIWYLTVLGSLATTQREYVALHAFRRLNLQMQSAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWAATHTAAGTSSGSTKRQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQVNEINSDNVPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLIKSREEIMGWMHQLKNREAQLTQQLHCLHRDLNAAAAAVRSQGSVGVDPDLLMARDQNRDALLQSLAAVVENRDKVLVEMSRLALLESRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAILPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVAKLPDEPYYKDPLLKPYLFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYEHVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSEDWAALINDAKSRNCYMDMDSLPKDFLVSKGPVYTSLPGKPSSNMRGMRSGGPRYRSMDMHMMESRSGAPSEDDENMGAPIGSRNGNHRQSRFSMENNVDDFDHGGDKSRDAWQYGIQKKQNSSGPMGKRDV* 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0314 1399 MobiDBLite consensus disorder prediction 137 178 - -
Vra9g0314 1399 Pfam AAA domain 1065 1261 IPR041679 -
Vra9g0314 1399 MobiDBLite consensus disorder prediction 1304 1323 - -
Vra9g0314 1399 PANTHER DNA2/NAM7 HELICASE FAMILY 1 1355 IPR045055 -
Vra9g0314 1399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 705 1290 IPR027417 -
Vra9g0314 1399 Coils Coil 891 911 - -
Vra9g0314 1399 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED 1 1355 - -
Vra9g0314 1399 Gene3D - 642 1086 IPR027417 -
Vra9g0314 1399 MobiDBLite consensus disorder prediction 567 584 - -
Vra9g0314 1399 MobiDBLite consensus disorder prediction 81 111 - -
Vra9g0314 1399 Pfam AAA domain 706 1058 IPR041677 GO:0004386
Vra9g0314 1399 CDD DEXXQc_SETX 706 1088 - -
Vra9g0314 1399 MobiDBLite consensus disorder prediction 1361 1381 - -
Vra9g0314 1399 MobiDBLite consensus disorder prediction 30 45 - -
Vra9g0314 1399 MobiDBLite consensus disorder prediction 214 243 - -
Vra9g0314 1399 MobiDBLite consensus disorder prediction 272 292 - -
Vra9g0314 1399 CDD SF1_C_Upf1 1089 1278 IPR041679 -
Vra9g0314 1399 MobiDBLite consensus disorder prediction 11 27 - -
Vra9g0314 1399 MobiDBLite consensus disorder prediction 401 434 - -
Vra9g0314 1399 MobiDBLite consensus disorder prediction 1 45 - -
Vra9g0314 1399 MobiDBLite consensus disorder prediction 68 292 - -
Vra9g0314 1399 MobiDBLite consensus disorder prediction 565 588 - -
Vra9g0314 1399 MobiDBLite consensus disorder prediction 1331 1399 - -
Vra9g0314 1399 Gene3D - 1087 1293 IPR027417 -
Vra9g0314 1399 MobiDBLite consensus disorder prediction 344 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0314 Vra-Chr9 2500127 2507989 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0314 - K10706 gmx:100794516 2520.73