Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0311 ATGGAAACTGTGGTTGGAATTGAGGATAATGATGATGGGAAGTTTGAAGACAGTGGACTTGACAGAAGCAGTTCTGCTCTGTCTTCACCAAAGCAAATTTCTAACCCAATTGTATACAAGCTTGTTCGGGTTGAAGGTGATGGAAGGTTAGTGCCTGCAACAGATGATGAAGTAATGGAGGTGGGGGATTTTCTTGAGTATGAAAACAGTGAAATGCATGTTGTTGCTGACACTGGACAGAGTTTAGAATGCATATCGATTGAAAGATCATCTTCTGGGAAGCTTCGATTGGAGTGCTCGGAAGGCTCCACAGAGGCTGATTTGGGGAAACTAAATGCAAAATTACAGTACATTGAGCAGATTTTGCAAAAGGTCAAAGAAGAGGAGAAACAACGCATATCATGTGGATCACCTGTTCATTCTCATGTAAACGTAGACAGCCAGTGTTCAGCTGATAAATGTCTTGTCACGGATGGGAATGTTCAATCTGAAACTCCCTACCAGGAAATTCCTTCTATAGCGTCGAGTTTAAATTATACTCATAGCAATCAATCTGGGAGTATGGATCAGTGTTCTAGACCTTCAGAAGGAGTAATAGAAAGTGGGTCATCTGCTTCTGCTGTCCATTCCAATTTGAAGCCTGACCTTTCAATGTCAGACGGAGAAATATGCTTGGACAAGCTATCAATCAGAGAACTTCATGAACTGTTTAAGGTAACTTTTGGTCGAGAAACTACTGTGAAAGATAAACAGTGGCTGAAAAGGAGGATTGCCATGAGTTTAACCAACTCATGTGATGTTTCAGCAACAACTTTCGTTATTAAAGATAACAAAATAGTTAGAAAATTTGTTGAAGAAAGTTCTGGAAATATGAATGTTGCGTCCTTAATTTCTTCAGAAAATATGACTGAAGAAGAGGATATCAACTTTAAGGATTCTTCTGCTGTAAATGCTTGTGGAATTGATGATAAACAAGTTGTTTCTGAAATAAGATTGAGAAATCAAAATACAGAATATGAATTGGAAGATATGACTAATCAAACAGAACAGAGAGCTGCAAAAAGAATTCGGAGACCTACAAAGAGATATATTGAAGAGCTCTCTGAAAATGAATCTAAAGAACACAGTCCTAGGTTGCCAGTATATAATAAAAGCATGGAACTTGGACATGTTTCTTCAACATCACATGTCAGGCCTGCTAGAAATACTTTTTCAGAGGTGAGAACATGTGGCACGAGGTTTGCATCTCTTGGAGGATCTGATGTCGAAATTCCTTGTGTGTCTTGGATTCGGAGAAGTCGTCCAAGGAAAGATATGGCATCTCTTATGAAATTCCATCCAAGTGCCATGAATGAGACTGCAAAATTGAGTAATAAGCTCATTGAGCACAGTTCTGATGCTGTTGGTGAGATTCCAGATAAAGTTTTCAAGTCTAGAATGCCTGCTACGTTTCATCAACCATCTTCTTCTGAACCTGAGAAAGAGAAGCAGTGTCCAGTAATAGGAGCAATTGAGCCACGACAGGAATTGAGGCCAAAAAGGGCAGATCCACCTGGCCATACTTCAGATGACAACATAGTTACTGTTCCCACTGCAAAAGGAGGGATGCGGAGGAAGCATCACCGGGCATGGACACTCGTTGAGGTGATAAAGTTGGTTGAAGGTGTGTCAAGGTGTGGAGCAGGGAGGTGGTCTGAAATCAAACGCCTCTCCTTTGCATCATACTCATACCGAACATCTGTTGATCTTAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTTGCAATGACACCTGCACCTGCTGATGAGGGGATCAATTCGCGGAAGCATGGTACGGCTCCAATTCCTGAGAAAATTTTACTACGTGTAAGAGAGCTTGCTGAGATGAATTCTCAGGTTCCTCCAAACATCAGCTCAAACAAGGTAGCAGCTGGTGCAGGGAGTGTGCATGAAGATAGATCAGGCTACTTGTAA 1977 0.4117 METVVGIEDNDDGKFEDSGLDRSSSALSSPKQISNPIVYKLVRVEGDGRLVPATDDEVMEVGDFLEYENSEMHVVADTGQSLECISIERSSSGKLRLECSEGSTEADLGKLNAKLQYIEQILQKVKEEEKQRISCGSPVHSHVNVDSQCSADKCLVTDGNVQSETPYQEIPSIASSLNYTHSNQSGSMDQCSRPSEGVIESGSSASAVHSNLKPDLSMSDGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFVIKDNKIVRKFVEESSGNMNVASLISSENMTEEEDINFKDSSAVNACGIDDKQVVSEIRLRNQNTEYELEDMTNQTEQRAAKRIRRPTKRYIEELSENESKEHSPRLPVYNKSMELGHVSSTSHVRPARNTFSEVRTCGTRFASLGGSDVEIPCVSWIRRSRPRKDMASLMKFHPSAMNETAKLSNKLIEHSSDAVGEIPDKVFKSRMPATFHQPSSSEPEKEKQCPVIGAIEPRQELRPKRADPPGHTSDDNIVTVPTAKGGMRRKHHRAWTLVEVIKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAMTPAPADEGINSRKHGTAPIPEKILLRVRELAEMNSQVPPNISSNKVAAGAGSVHEDRSGYL* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0311 658 MobiDBLite consensus disorder prediction 509 529 - -
Vra9g0311 658 MobiDBLite consensus disorder prediction 1 30 - -
Vra9g0311 658 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 536 595 IPR017930 -
Vra9g0311 658 Coils Coil 327 347 - -
Vra9g0311 658 MobiDBLite consensus disorder prediction 638 658 - -
Vra9g0311 658 SMART sant 540 593 IPR001005 -
Vra9g0311 658 PANTHER TRF-LIKE 3 1 658 - -
Vra9g0311 658 Gene3D - 531 641 - -
Vra9g0311 658 SUPERFAMILY Homeodomain-like 542 601 IPR009057 -
Vra9g0311 658 Coils Coil 108 128 - -
Vra9g0311 658 CDD SANT_TRF 542 592 - -
Vra9g0311 658 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 1 658 - -
Vra9g0311 658 Pfam Myb-like DNA-binding domain 543 591 IPR001005 -
Vra9g0311 658 ProSiteProfiles Myb-like domain profile. 544 591 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0311 Vra-Chr9 2478829 2485841 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0311 - - gmx:100775511 1092.8