Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0303 ATGTCTTTGCTTCGTCGGAGAAAAGGACCGGAGCCGGAAAAGGTTCCGGGCCCAAGTTCAGAGCCGAATGTTCTAAGCGAAGAGGAGAAAGAAGATGATAAGAATAAGAAGAGTAAGAAGACGAAAGATGAGTTGAAGGAGAAGAGGAAGAGGAAATGGTCGTGCTTGGATCACTGTTGCTGGTGGGTTGGGTGTATTTGCACGGTGTGGTGGTTTCTTCTTTTTCTGTATCAGCTGATGCCTTCTTCGATTCCTCAGTACGTGACCGAGGCATTTACTGGGCCCATGCCTGATCCACCGGGCCTTAAGCTCAAGAAGGAGGGGCTCAGGGTGAAACACCCTGTTGTTTTTGTGCCGGGGATTGTCACTGGGGGGCTTGAACTATGGGAGGGTCATCAGTGTGCTGAAGGGTTATTCAGGAAACGCTTGTGGGGTGGTACCTTTGGAGAAGTATATAAAAGACCTTCATGCTGGGTGGATCACATGTCACTGGACAATGAAACAGGATTAGATCCACCAGGCATAAGAGTTAGGCCTGTCTCTGGACTTGTAGCTGCTGATTACTTTGCTGCAGGATACTTTGTTTGGGCAGTTCTGATTGCTAACTTGGCTCGCATTGGTTATGAAGAAAAAACCATGTACATGGCCTCGTATGATTGGAGAATAGCATTTCAGAACACTGAGGTGAGGGATCAAACACTTAGTCGGATAAAAAGCAACATAGAACTTATGGTTGCTACTAATGGTGGCAACAAGGCAGTTATTATTCCACATTCAATGGGTGTGTTATACTTTCTTCATTTTATGAAATGGGTTGAAGCACCAGCTCCAATGGGTGGTGGTGGAGGACCAGATTGGTGTTCTAAATATATAAAGGCAGTTTTAAACATTGGTGGGCCATTTTTGGGTGTCCCAAAGGCTATAGCAGGGCTCTTCTCAGCTGAGGCCAGGGATATTGCAGTTGCCAGGACAATAGCTCCAGGATTTTTAGATAACGATCTGTTTCGGCTCCAAACCTTGCAACATGTAATGAGGATGACTCGTTCTTGGGACTCAACAATGTCAATGATACCAAGAGGAGGAGATACTATATGGGGTGGTCTTGACTGGTCACCAGAGGAAGGCTATCACCCTGGCAAGAGAAAGCACAGCGATGGTTATACTCAGCTAGCACACCAAGAGACAAATGAAACACATTCTGTCGTCAACTATGGAAGAATGATATCATTTGGAAGAGACGTGGCTGAGGCACCCTCCTCTGAGATTGAGATAACTGACTTTAGGGGTGCTCTCAAGGGTCGCAGTGTTGCTAATACCACGTGTCGCGATGTGTGGACCGAATACCATGAAATGGGAATTGAGGGGGTAAGAGCAGTTGCTGAACATAAGGTTTACACAGCTGGCTCAATCGTAGACCTGCTTCATTTTGTTGCTCCAAAGATGATGGCTCGTGGTAGTGCTCATTTCTCTTATGGAATTGCTGACAATTTGGATGATCCTAAATACAGTCACTACAAGTATTGGTCAAATCCCTTGGAAACAAAATTACCAAATGCTCCTGATATGGAAATCTTCTCTTTGTATGGAGTTGGCTTACCAACTGAAAGATCTTATGTATACAAGTTAACTCCCTTTGCCTCCTGTTACATCCCGTTTGAAATTGACACTACACAAGATGATGGTAATGGTGAAGATAGGTGGCTGCAAGGTGGAGTTTACACTGTTGATGGTGATGAGACCGTGCCAGTTCTGAGCTCAGGCTTCATGTGTGCCAAAGGTTGGCGTGGAAAAACAAGATTCAACCCTTCTGGCATTCGCACCTACGTTAGAGAATATGATCATTCTCCTCCAGCCAACTTGCTAGAAGGAAGAGGCACACAAAGTGGTGCTCATGTTGACATCATGGGAAACTTTGCATTGATTGAGGATGTTATTAGATTGGCAGCAGGGGCCACAGGAGAAGATCTAGGAGGTGATAGAGTCTACTCTGATATCTTCAAATGGTCTGAGAAAATCAAGTTGCCACTGTGA 2031 0.4535 MSLLRRRKGPEPEKVPGPSSEPNVLSEEEKEDDKNKKSKKTKDELKEKRKRKWSCLDHCCWWVGCICTVWWFLLFLYQLMPSSIPQYVTEAFTGPMPDPPGLKLKKEGLRVKHPVVFVPGIVTGGLELWEGHQCAEGLFRKRLWGGTFGEVYKRPSCWVDHMSLDNETGLDPPGIRVRPVSGLVAADYFAAGYFVWAVLIANLARIGYEEKTMYMASYDWRIAFQNTEVRDQTLSRIKSNIELMVATNGGNKAVIIPHSMGVLYFLHFMKWVEAPAPMGGGGGPDWCSKYIKAVLNIGGPFLGVPKAIAGLFSAEARDIAVARTIAPGFLDNDLFRLQTLQHVMRMTRSWDSTMSMIPRGGDTIWGGLDWSPEEGYHPGKRKHSDGYTQLAHQETNETHSVVNYGRMISFGRDVAEAPSSEIEITDFRGALKGRSVANTTCRDVWTEYHEMGIEGVRAVAEHKVYTAGSIVDLLHFVAPKMMARGSAHFSYGIADNLDDPKYSHYKYWSNPLETKLPNAPDMEIFSLYGVGLPTERSYVYKLTPFASCYIPFEIDTTQDDGNGEDRWLQGGVYTVDGDETVPVLSSGFMCAKGWRGKTRFNPSGIRTYVREYDHSPPANLLEGRGTQSGAHVDIMGNFALIEDVIRLAAGATGEDLGGDRVYSDIFKWSEKIKLPL* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0303 676 Gene3D alpha/beta hydrolase 144 332 IPR029058 -
Vra9g0303 676 SUPERFAMILY alpha/beta-Hydrolases 103 502 IPR029058 -
Vra9g0303 676 Coils Coil 676 676 - -
Vra9g0303 676 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 1 23 676 - -
Vra9g0303 676 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 23 676 - -
Vra9g0303 676 MobiDBLite consensus disorder prediction 1 43 - -
Vra9g0303 676 Coils Coil 28 48 - -
Vra9g0303 676 MobiDBLite consensus disorder prediction 24 43 - -
Vra9g0303 676 Pfam Lecithin:cholesterol acyltransferase 139 636 IPR003386 GO:0006629|GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0303 Vra-Chr9 2382448 2387794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0303 155 676 Acyl Lipid Metabolism Gene Families AT5G13640 76.291 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0303 K00679 - gmx:100800857 1258.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0303 9 2382448 2387794 Vra9g0303 9 2382448 2387794 ECH