Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0269 ATGGCATCTCAAGGTTTGTGTCCTTTGATAAAGAATATTCTTCTTTTGGACTCTGAAGGGAAGCGTGTGGCAGTCAAGTATTACTCAGATGACTGGCCGACAAACAATTCAAAGTTAGCTTTTGAGAAGTTTGTATTTAGTAAGACTGTTAAGACAAATGCTCGTACCGAAGCTGAGGTAACACTACTTGAGAACAATATCATTATTTACAAATTTGTACAAGACTTGCATTTCTTTGTTACTGGTGGTGATGATGAAAATGAGCTCATTTTAGCATCGGTACTTCAAGGTTTCTTTGATGCAGTCACCCTTCTATTGAGGAGCAATGTTGACAAAAGAGAGGCACTTGAGAACTTGGATCTCATTCTGTTGTGTCTTGATGAGATTGTTGATGGAGGGATGATACTTGAAACAAATGGAACTCTTATTGCTGAAAAAGTGACCTCTCATAGCTTGGATGCTGATGCCCCCTTGTCAGAGCAGACACTGACTCAAGCTTGGGCTACAGCCAGAGAACATTTGACAAGAACCCTTTTAAAATGA 543 0.3959 MASQGLCPLIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTVKTNARTEAEVTLLENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREALENLDLILLCLDEIVDGGMILETNGTLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0269 180 Pfam Clathrin adaptor complex small chain 10 149 IPR022775 -
Vra9g0269 180 PANTHER ZETA-COAT PROTEIN 5 180 IPR039652 GO:0006890|GO:0030126
Vra9g0269 180 SUPERFAMILY SNARE-like 10 151 IPR011012 -
Vra9g0269 180 CDD Zeta-COP 11 146 - -
Vra9g0269 180 Gene3D - 5 150 - -
Vra9g0269 180 PANTHER CLATHRIN ADAPTOR COMPLEX SMALL CHAIN 5 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0269 Vra-Chr9 2004376 2008052 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0269 K20472 - gmx:547466 332.028