Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0261 ATGATAATGCCTACTATGTGTTTGTTAATTCTCTTTTCTGTCATTTATGGCAGTGTAGCCACTCATCATTTTAGCAGAAATCTTCAGACTCTGTCTTCTGATTCCAATGATCAACCTTACAGAACAGCTTATCACTTCCAACCTCCCAAGAATTGGATAAATGATCCCAATGGACCAATGAGATATGGAGGACTTTATCATCTGTTCTATCAATACAATCCAAAAGGTGCAGTTTGGGGAAATATTGTGTGGGGACATTCAGTGTCAAAGGATCTTGTGAACTGGACCACACTAGATCCTGCCATCTTCCCATCTCAGCCGTCTGATATAAATGGTTGTTGGTCAGGATCAACCACACTGCTTCCTGGGAACAAACCAGCCATTTTGTATACAGGAATTGACTCCATGAAAAACGAAGTCCAAAACTTGGCCAAGCCCAAAAATTTGTCTGACCCTTTTCTTAGGGAATGGGATAAGTTCCCCCAAAACCCTGTAATGCAACCAACTAGTGATAACAAAATAGTTCCAGACTCATTTAGGGATCCCACCACTGCTTGGCTAGGACAAGATGGACACTGGAGAGTACTTGTTGGAAGCAGAAGAAGAACTAGGGGAATGGCACTGTTGTATAGGAGCAAAGACTTTGTTAATTGGGTTCAAGCCAAGCACCCTTTTTATTCAACCAAAGACAGTGGAATGTGGGAGTGCCCAGATTTTTTTCCAGTTTTGAAGAATGGTCAATTGGGTGTTGAGACATCTGTGAATGGTGATGATGTTAGGCATGTACTCAAGGCTAGCTTGAAAGGACATGATGATTATATTATAGGGAATTATAATACTGCCAAGGATGTGTTTGTCCCTGATAAAGGGTTTGATGAATTTGTTTTAAGATTTGATTATGGAAAATACTATGCCTCAAAATCTTTCTTTGATGATGGAAAGAAGAGAAGGGTTTTGCTTGGGTGGGTGGACGAATCATCAAGTGAGGCAGATGATATCAAGAAAGGATGGTCTGGAATCATTGCAATTCCAAGAGCCATTTGGTTGCACAGGTCTGGTAAACAGCTGGTACAATGGCCTGTGATGGAAATTGAAAAACTGCGTGCAAACCCAGTGAGCTTGCCCCCACAAGTGCTAAAAGGAGGACAATTGCTTCAAATTAATGGTGTTACAGCAACACAGGCTGATGTTGAAATTTCATTTGAAGTGAGTAAATTGATAGAAGCTGAAGTATTGGAAAATTGGACAGACCCCCAAATTCTGTGTAGTCAAAAGGGTTCATCCATTAAAAGTGAATTGGGGCCGTTTGGTCTGCTAGTTTTTGCTTCTGAGGGATTGGAAGAGTTCACATCAGTTTTCTTCAGAATATTCAAATACCAAAATAAAAATTTGGTGCTCTTATGCAGTGATCAAAGCAGGTCTTCCTTAAATAAAGACAATGGTTTGACCACTTATGGAGCTTTTGTTGACGTGGAACCTCTTCATGAACAGCTTTCACTGAGAACACTGACTGATCATTCTGTCCTAGAGAGTTTTGGAGGAGAGGGAAGAGCTTGTATCACAGCCAGAGTTTACCCCACATTGGCGATCAATGATAAAGCACAACTATATGCTTTCAATAATGGTACTGCTGATGTTAATATTACAAGACTGAATGTTTGGAGCATGAAGAAAGCACAAATAAATTGA 1689 0.4032 MIMPTMCLLILFSVIYGSVATHHFSRNLQTLSSDSNDQPYRTAYHFQPPKNWINDPNGPMRYGGLYHLFYQYNPKGAVWGNIVWGHSVSKDLVNWTTLDPAIFPSQPSDINGCWSGSTTLLPGNKPAILYTGIDSMKNEVQNLAKPKNLSDPFLREWDKFPQNPVMQPTSDNKIVPDSFRDPTTAWLGQDGHWRVLVGSRRRTRGMALLYRSKDFVNWVQAKHPFYSTKDSGMWECPDFFPVLKNGQLGVETSVNGDDVRHVLKASLKGHDDYIIGNYNTAKDVFVPDKGFDEFVLRFDYGKYYASKSFFDDGKKRRVLLGWVDESSSEADDIKKGWSGIIAIPRAIWLHRSGKQLVQWPVMEIEKLRANPVSLPPQVLKGGQLLQINGVTATQADVEISFEVSKLIEAEVLENWTDPQILCSQKGSSIKSELGPFGLLVFASEGLEEFTSVFFRIFKYQNKNLVLLCSDQSRSSLNKDNGLTTYGAFVDVEPLHEQLSLRTLTDHSVLESFGGEGRACITARVYPTLAINDKAQLYAFNNGTADVNITRLNVWSMKKAQIN* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0261 562 CDD GH32_Fruct1-like 51 349 - -
Vra9g0261 562 Gene3D - 371 556 - -
Vra9g0261 562 Gene3D Glycosyl hydrolase domain; family 43 49 370 IPR023296 -
Vra9g0261 562 Pfam Glycosyl hydrolases family 32 C terminal 363 555 IPR013189 -
Vra9g0261 562 ProSitePatterns Glycosyl hydrolases family 32 active site. 45 58 IPR018053 GO:0004553|GO:0005975
Vra9g0261 562 PANTHER CELL-WALL INVERTASE 6 562 - -
Vra9g0261 562 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 6 562 - -
Vra9g0261 562 Pfam Glycosyl hydrolases family 32 N-terminal domain 45 360 IPR013148 -
Vra9g0261 562 SUPERFAMILY Arabinanase/levansucrase/invertase 36 361 IPR023296 -
Vra9g0261 562 SUPERFAMILY Concanavalin A-like lectins/glucanases 360 558 IPR013320 -
Vra9g0261 562 SMART glyco_32 45 516 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0261 Vra-Chr9 1944703 1948642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0261 50 562 Glycoside Hydrolase AT1G55120 60.342 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0261 K01193 - gmx:547681 972.615