Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0228 ATGTCTGGAATCGTGATTGTTTTCGACTTCGACAAGACCATTGTCGATGTCGACAGCGACAACTGGGTCATCGACGAATTGGGTTTCACCGATTTGTTCAACCAGCTTCTTCCGACCATGCCTTGGAACACTCTCATGGACACAATGATGATGGAGCTTCATTCAAATGGTAAAACCATTAAGGACATTGAAGAGGTTCTGCGTAAGATTCCCTTGCACCCAAGAGTAATACCTGCTATTAAGGCAGCTCATGCTTTAGGGTGTGATTTGAGGATTGTGAGTGATGCAAACACGTTTTTCATTGAGACTATTTTGAAGCATTTGGGAATTAGAGAATATTTCTCAGAAATCAATACTAACCCCGGTTATGTGAATGAAGAAGGAAGGTTAAGGATTCTGCCTTACCATGACTTCAACAAAGCTTCCCATGGCTGCAATTTGTGCCCTCCAAACATGTGCAAGGGTTTAGTGATAGAGAGAATTGAAGATTCAATATCAGAAGAGGATAAGAGATTGATCTATCTTGGAGATGGAAGTGGAGACTATTGTCCAAGTTTGAGGTTGAAAGACAAGGACTTTATGATGCCAAGGAAGAACTTTCCGGTGTGGGATTTGATATGCAGAGATCCTTCACTTGTTAAGGCTGAGATTCATGGGTGGAGTGATGGTGAAGAACTTGAACAAGTTTTGCTGCACTTGATCAACAAAATATCAATGGAGCAAAATTCTACCTTCATTTCATCTGATTGCAAGCTTCAGACTCTGTCAGTCTCTGCTTTGGAGGCTTTGCCCAAAGTTCTACCAGTTCGGCCATAA 816 0.4179 MSGIVIVFDFDKTIVDVDSDNWVIDELGFTDLFNQLLPTMPWNTLMDTMMMELHSNGKTIKDIEEVLRKIPLHPRVIPAIKAAHALGCDLRIVSDANTFFIETILKHLGIREYFSEINTNPGYVNEEGRLRILPYHDFNKASHGCNLCPPNMCKGLVIERIEDSISEEDKRLIYLGDGSGDYCPSLRLKDKDFMMPRKNFPVWDLICRDPSLVKAEIHGWSDGEELEQVLLHLINKISMEQNSTFISSDCKLQTLSVSALEALPKVLPVRP* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0228 271 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 269 IPR016965 GO:0016791
Vra9g0228 271 PIRSF PLP_phosphatas_PHOSPHO2 1 238 IPR016965 GO:0016791
Vra9g0228 271 Gene3D - 2 189 IPR023214 -
Vra9g0228 271 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 198 IPR006384 GO:0016791
Vra9g0228 271 PANTHER INORGANIC PYROPHOSPHATASE 1 269 - -
Vra9g0228 271 Pfam Putative Phosphatase 4 234 IPR016965 GO:0016791
Vra9g0228 271 SUPERFAMILY HAD-like 5 187 IPR036412 -
Vra9g0228 271 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0228 Vra-Chr9 1651794 1653743 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0228 K13248 - gmx:100785878 513.457