Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0214 ATGTTGTTGCCAACCAGTGGAGTAGTAGGGATGAATTCTGTAATGGATGATATGGCTTTGATTCAGCAAAGTCAGAGACATAATTTGGTTGTGAGAGAACTTGGTGAGGAGATTGATTTAGAAATTGGACCTGGGGATGATGACCCTTCGTTTGGTAACGCTACTCTAATTGGTGCACCAATGCGGGAATCTTCCGCAGAAGAACATGGTGAGAGCAAGCAGATGGCAATGGTTTCTCAACTTTCTAATGATGCTCAAGATATGTCCAAGAACCAGCAAGTGAAAAGGAAGAAAAAGGTTGTTAAAAGATGGAGAGAAGAATGGGCAGACACCTATAAATGGGCTTTTGTAGATATGAAGGATGGAACACCTAGGATTTTCTGCTCTGTCTGCAGGGAGTATGGGCGAAAGCATAGAAGAAATCCTTATGGGAATGAGGGCAGTCGTAATATGCAAATGAGTGCTCTGGAAGAACACAATAACAGTTTGCTTCACAAAGAAGCTCTTCGTCTTCAAATGGCCTCCAAAGATAAAATTGTGGTTGACAAGCCCGTTTACGTAAAAGCAGGATCAATACTTGAAGCTACACTAAAAAGGGATCCTCATGAGTTTGAATTCATTCAGGCAGTCCAGGAAGCAGTTCAAGCCCTTGAAAGAGTCATAGCAAAAAATTCTCGATATGTTAATATCATGGAGCGCTTGTTGGAACCTGAACGAATGATTGTTTTTCGAGTTTCATGGGTGGATGATAGGGGTGAGACACATGTAAATCGAGGCTTTAGGGTACAATTTAACCAGTCAATGGGTCCATGTAGGGGAGGTATTCGTTTTCATCCATCAATGAATTTAAGTATTGCCAAGTTCCTTGGTTTTGAACAGACTTTAAAGAATGCCTTATCGCCATACAAATTAGGAGGAGCAGCTGGTGGAAGTGATTTTGATCCAAAAGGAAAAAGTGATAATGAGATTATGCGATTTTGCCAAAGTTTCATGAGTGAGATGTATCGCTACCTAGGGCCTGACAAGGACCTTCCATCAGAGGAAATGGGTGTTGGTACTCGAGAAATGGGATATCTTTTTGGACAGTATAGACGTCTCGCTGGTCATTTTCAGGGAAGTTTTACAGGGCCAAGGATCTTTTGGTCTGGCTCCAGTCTTCGACCTGAAGCTACTGGCTATGGACTGGTTTTCTTTGCGCAGATCATGCTTGCTGACATGAATAAAGAACTTAAAGGATTAAGATGTGTTGTGAGCGGCTCTGGAAAGATTGCAATGCATGTTTTGGAGAAGCTAATTGCTTATGGTGCACTTCCGATTTCAGTATCAGATTCCAGAGGATATTTGGTTGATGAGGATGGATTTGACTACATGAAAATATCATTTCTGAGAGACATCAAAGCTCAGCAAAGAAGTTTGCGAGACTATTCAAAAACCTATGCTCGGTCCAAATATTATGATGAAGCAAAACCATGGAGTGAAAGGTGTGATGTTGCATTTGCTTGTGCTTCACATAATGAAATTGATCAATCTGATGCCATTAACTTGGTTAATTCAGGTTGTCGTATACTTGTAGAAGGTTCAAACATGCCTTGTACCCCTGAGGCAGTTCAGATTTTCAGAAAAGCTAGTGTTCTCATTGCTCCTGCAATGGCTGCTGGTGCTGGAGGGGTTGTAGCTGGAGAACTTGAACTGAATCATGAATGCAGTTTGATGCACTGGTCACCGGAGGACTTTGAATCTAAATTGCAGGAAGCAATGAAACAGACTTATCAGAGAGCTATAAAAGCTGCAACTGACTTTGGTTATCAAAAAGAAAGCCCTGAGGCTCTGGTGCATGGAGCAGTCATATCTGCCTTTCTAACCATTGCCCAAGCCATGACTGATCAAGGTTCTATATAG 1899 0.4176 MLLPTSGVVGMNSVMDDMALIQQSQRHNLVVRELGEEIDLEIGPGDDDPSFGNATLIGAPMRESSAEEHGESKQMAMVSQLSNDAQDMSKNQQVKRKKKVVKRWREEWADTYKWAFVDMKDGTPRIFCSVCREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKDKIVVDKPVYVKAGSILEATLKRDPHEFEFIQAVQEAVQALERVIAKNSRYVNIMERLLEPERMIVFRVSWVDDRGETHVNRGFRVQFNQSMGPCRGGIRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRPEATGYGLVFFAQIMLADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGALPISVSDSRGYLVDEDGFDYMKISFLRDIKAQQRSLRDYSKTYARSKYYDEAKPWSERCDVAFACASHNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVQIFRKASVLIAPAMAAGAGGVVAGELELNHECSLMHWSPEDFESKLQEAMKQTYQRAIKAATDFGYQKESPEALVHGAVISAFLTIAQAMTDQGSI* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0214 632 Gene3D Glutamate Dehydrogenase, chain A, domain 3 561 632 - -
Vra9g0214 632 SMART ELFV_dehydrog_3 384 630 IPR006096 GO:0006520|GO:0016491
Vra9g0214 632 Gene3D - 389 554 - -
Vra9g0214 632 Gene3D Leucine Dehydrogenase, chain A, domain 1 235 370 - -
Vra9g0214 632 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 383 630 IPR006096 GO:0006520|GO:0016491
Vra9g0214 632 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 237 364 IPR006097 GO:0006520|GO:0016491
Vra9g0214 632 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 191 376 IPR046346 -
Vra9g0214 632 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 7 631 - -
Vra9g0214 632 PANTHER BNAA06G02140D PROTEIN 7 631 - -
Vra9g0214 632 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 294 308 IPR006095 GO:0006520|GO:0016491
Vra9g0214 632 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 373 395 IPR006095 GO:0006520|GO:0016491
Vra9g0214 632 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 415 435 IPR006095 GO:0006520|GO:0016491
Vra9g0214 632 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 552 563 IPR006095 GO:0006520|GO:0016491
Vra9g0214 632 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 383 630 IPR036291 -
Vra9g0214 632 Gene3D Glutamate Dehydrogenase, chain A, domain 3 191 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0214 Vra-Chr9 1505272 1526435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0214 213 510 EF-hand Containing Proteins AT5G07440 30.132 5.43e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0214 K00262 - gmx:100788009 1191.41