Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0209 ATGGCCAGTATTCTAGGTCCTTCTTTAAGCATAGTCAGGGCCTATGCATTAAGAAATGAGCCACTAGTTGTCTCTAAAATCACTGCAGTAGGAGAAAACTCTCATTCACCACTATGGTTTTCATGCACTCGCGCTAGAAAATCTGCTAGAAACCATTTTCAGCTCAAATCCTCAAATGGGCTTCCACTGAATGCTGTTTCTTCAAATGATGGTTTAGCTGGAACTTCGTTGGCTAAAGAAGATAGCCAGCTCCAACCACTTCATGGACTCTTTCCATTGTCAGACTCAGAATGTACAGGATCCAATCTTAGTATAACAGTTGTTGGAGCTTCTGGAGACCTTGCCAAAAAGAAGATTTTTCCAGCACTCTTTGCACTCTTTTATGAAGATTGGCTACCTGAGAATTTTATTGTTTTTGGATTTGCTCGGACTAAAATGACCAATGAAGAATTAAGGAACATGATTAGCAAAACCTTAACATGCAGAATTGACAAAAGAGAAAATTGCGAAGACAAAATGGATCAGTTCTTAAAAAGATGCTTTTACCATTCTGGTCAATATAATTCTGAGGAGCACTTTTCAGAATTGGATATCAAGCTGAAAGAGAAAGAGGGTGGAAAATTATCAAACAGATTGTTTTATTTGTCAATACCTCCAAACATATTTGTGGATGTGGTGAGATGTGCTAGCCAAAAGGCTTCTTCCAGAGATGGATGGACAAGGGTTATTGTTGAAAAGCCATTTGGTCGTGACTCGGAATCATCTAGTGAGCTAACAAAATGCTTGAAGCAGTACCTCACTGAAGACCAAATATTCAGGATTGACCATTACTTGGGTAAGGAGCTTGTGGAGAATCTATCAGTGCTTCGCTTTTCAAATCTTGTTTTTGAGCCTCTATGGTCCCGGAATTACATTCGCAATGTGCAGATCATATTTTCTGAAGATTTTGGAACTGAAGGAAGAGGAGGTTATTTTGATCACTACGGAATCATTCGGGATATAATGCAAAATCATCTTCTGCAAATACTAGCTTTGTTTGCAATGGAAACACCAGTCAGCTTAGCTGCTGAGGACATCAGAAATGAAAAGGTGAAGGTTCTGAGATCAATGAGACCACTGCAGCTTGAAAATGTTGTTGTTGGTCAATACAAGGGCCACAACAAGGGTGGAAAATCATATCCTGCTTATACGGATGATGCAACTGTTCCAAAGGGTAGTCTTACTCCAACATTTGCAGCAGCAGCTCTTTTTATAGACAATGCCAGATGGGATGGAGTTCCTTTTCTCATGAAAGCTGGCAAGGCTCTCCATACTAAACGTGCAGAAATCAGAGTACAATTCAGACACGTCCCAGGTAACTTGTACAAGAGGAATTTTGGAACTGATCTAGACAAGGCTACGAATGAGCTTGTGCTTCGTGTACAACCTGATGAAGCTATATATTTGAAAATCAACAATAAAGTGCCAGGTCTGGGAATGAGATTAGACAGAAGTGACTTGAATTTGCTTTTCCGAGCAAGATATCCAAGTGAAATACCAGATGCATATGAGAGGTTACTCCTAGATGCCATTGAAGGAGAGCGAAGGCTGTTCATTAGAAGTGATGAGCTTGATGCAGCTTGGTCACTGTTCACTCCTTTGCTAAAAGAACTTGAAAACAAGAAGATTGCTCCAGAGCTCTACCCCTATGGTAGCAGAGGACCGGTTGGAGCACATTACCTTGCTGCAAGGCACAATGTTAGATGGGGAGATCTTGGTAATGAAGACTGA 1770 0.4062 MASILGPSLSIVRAYALRNEPLVVSKITAVGENSHSPLWFSCTRARKSARNHFQLKSSNGLPLNAVSSNDGLAGTSLAKEDSQLQPLHGLFPLSDSECTGSNLSITVVGASGDLAKKKIFPALFALFYEDWLPENFIVFGFARTKMTNEELRNMISKTLTCRIDKRENCEDKMDQFLKRCFYHSGQYNSEEHFSELDIKLKEKEGGKLSNRLFYLSIPPNIFVDVVRCASQKASSRDGWTRVIVEKPFGRDSESSSELTKCLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRNYIRNVQIIFSEDFGTEGRGGYFDHYGIIRDIMQNHLLQILALFAMETPVSLAAEDIRNEKVKVLRSMRPLQLENVVVGQYKGHNKGGKSYPAYTDDATVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLGMRLDRSDLNLLFRARYPSEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPLLKELENKKIAPELYPYGSRGPVGAHYLAARHNVRWGDLGNED* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0209 589 Gene3D Dihydrodipicolinate Reductase; domain 2 274 583 - -
Vra9g0209 589 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 275 582 - -
Vra9g0209 589 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC 94 588 - -
Vra9g0209 589 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 99 288 IPR036291 -
Vra9g0209 589 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 275 281 IPR019796 GO:0004345|GO:0006006
Vra9g0209 589 PRINTS Glucose-6-phosphate dehydrogenase signature 241 254 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vra9g0209 589 PRINTS Glucose-6-phosphate dehydrogenase signature 265 293 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vra9g0209 589 PRINTS Glucose-6-phosphate dehydrogenase signature 317 334 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vra9g0209 589 PRINTS Glucose-6-phosphate dehydrogenase signature 335 351 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vra9g0209 589 PRINTS Glucose-6-phosphate dehydrogenase signature 422 448 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vra9g0209 589 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 94 588 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vra9g0209 589 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 288 582 IPR022675 GO:0004345|GO:0006006|GO:0050661
Vra9g0209 589 Gene3D - 99 273 - -
Vra9g0209 589 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 103 583 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vra9g0209 589 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 107 285 IPR022674 GO:0006006|GO:0016614|GO:0050661
Vra9g0209 589 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 102 584 IPR001282 GO:0006006|GO:0016614|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0209 Vra-Chr9 1463379 1468044 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0209 K00036 - gmx:100801945 1091.64