Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0197 ATGAATACGAAGTTGTGTGTTCTGTTTGTTTTTGCTTTTGTAACATGGCCATGTCAAGGCTCAGACTACCAAGTTTTCCCTCTCCGAATGAAAACTGGCTACAATGAACAATACCCAATAGAGGTATCATGCGAAAGTTGGAGACTTGGCGTGGAGGCGAACAACCTCGTCAAATGGAAAACTGTACCTGCGCCATGCCAAGAACACGTAGCAGACTATCTTCTCGGCGACCAATATAGATCAGACTCCAAAACAGTTTGCCGTGAGGCTTACTTTTATGCTAAAACTCTCAATATCACTCAAAAAGACATCTTTGTCTTTGATGTCGATGACACTGCACTCTCAAATCTTCAATATTTTGCTAACCATGGTTTTGGGGTGGAAGAACATAATGCTACGGCTTTCAAGATCTGGGTTTCCTACGGTGAGGCATTTGCACTGCCCGAGACTCTTAAACTCTACAACAAACTGCTGGCTCTTGGGATCAAAGTTGTGTTCATCACAGAAAGACCACTGGATCTGAAGGATGTGACTGTTTCCAACTTACAGAATGTTGGATTCTACAAATGGGACAAGTTGATTGCCAGGGATCCATCCATATATTCTGGGAAATTATCAAATGCTTTTAAATCTTCTGAGAGAACGAAGCTGGCTGAAGAGGGATACAGAATCGTTGGAAACATTGGAGATCAATGGAGTGATATTGTTGGAGATAAAAGAGGGTTTAGGACCTTTAAGCTGCCAAATCCCTTGTACTATGATTGA 765 0.4196 MNTKLCVLFVFAFVTWPCQGSDYQVFPLRMKTGYNEQYPIEVSCESWRLGVEANNLVKWKTVPAPCQEHVADYLLGDQYRSDSKTVCREAYFYAKTLNITQKDIFVFDVDDTALSNLQYFANHGFGVEEHNATAFKIWVSYGEAFALPETLKLYNKLLALGIKVVFITERPLDLKDVTVSNLQNVGFYKWDKLIARDPSIYSGKLSNAFKSSERTKLAEEGYRIVGNIGDQWSDIVGDKRGFRTFKLPNPLYYD* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0197 254 PANTHER VEGETATIVE STORAGE PROTEIN 1-RELATED 3 253 - -
Vra9g0197 254 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 33 253 IPR005519 -
Vra9g0197 254 TIGRFAM plant-AP: plant acid phosphatase 41 253 IPR010028 GO:0003993
Vra9g0197 254 CDD HAD_VSP 70 254 - -
Vra9g0197 254 Gene3D - 41 254 IPR023214 -
Vra9g0197 254 PIRSF VSP 1 253 IPR014403 -
Vra9g0197 254 SUPERFAMILY HAD-like 101 250 IPR036412 -
Vra9g0197 254 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 3 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0197 Vra-Chr9 1392898 1394075 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0197 - - gmx:100795218 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0197 9 1392898 1394075 Vra9g0197 9 1392898 1394075 ECH