Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0189 ATGAGGAAGGTGGTGCTGTGTGCGACGGTGATCGGAGCCGCGACGGCCTGCGCCGTGGGTGCGGTGGCGGTGCAGAGGTACGTCAGGAAATGCCGACGGTGGGGAAGAGCCTTGGAAATATTGCAGGAATTAGAGGAGAAGTGTGCGACGCCGACGTGGAAGCTGAAGCGCATTGCGGATGCCATGAACGTGGAGATGCACGCCGGCCTTGCTTCCGAAGGTGGTAGCAAGCTCAAGATGCTCATCACCTACGTTGATAAGCTCCCAACAGGGAATGAGGAAGGACTATATTATGCCGTGGATCTTGGAGGGACTAATTTTCGGGTGTTACGTGTGCAATTGGGAGGCAAGGAAGGAGGTATCGTTAGTCAAGAATTTACTGAGGTGTCAATTCCTCCTGATTTGATGGTTGGAACATCAACTGCACTCTTTGACTATATTGCAGCAGAAGTTGGAAAATTTGTTGCCCAAGAGAGTGAAGATTTTAAAGTTCCTCCAGGTAGACAGAGAGAGATAGGTTTTACCTTTTCCTTTCCTGTCATGCAAACGTTAATTGCTTCTGGGAACCTTATCAAGTGGACAAAAGGCTTCAACATAGAGGACGCTGTTGGTAAAGATGTTGTGGAAGAACTAATGAAAGCCATTCGGAAACAAGGTCTTGNTATGCGTGTAAATGCTCTGGTCAATGATACAGTTGGAACATTAGCAGGAGGTCGATATACACACAAAAATGTCATTGCTGCTATTATTTTAGGAACTGGAACAAATGCTGCATATGTAGAGCGTGTTCAAGCAATACCAAAATGGCATGGTCCTTTGCCAGATTCTGGAGAGATGGTTATCAACATGGAGTGGGGAAACTTTAGGTCATCATACCTTCCATTAACTGAGTATGATCATGCCCTAGATGCTGAGAGTTTAAACCCTGGTGAACAGATTTTTGAGAAGATAATTTCGGGCATGTACTTGGGAGAAATTGTTCGTAAAGTACTATGCAAAATGGCCGAAGAAGCTTTACTTTTTGGTGACAATGTTCCCCCAAAACTAAAAGATCCGTTCATATTCAGGACACCTGACATGTCTGCAATGCATCATGATTCCTCGGCTGATCTCAACGTGGTAGGAAGCAAACTGAAGAACATTTTCGAGATATCTGATAGCTCCCTAGAAGTGAGGAAGGTGGTTGTGGAGATCTGCAATATTATTGCTACCCGTGGTGCTCGTCTTGCTGCTGCTGGAATCTTAGGTATCTTGAAGAAGATGGGAAAAGACAATATGAGTGATGTTAATGGTGAGAAGAATGTGATAGCCATGGATGGTGGATTGTATGAGCACTACACTGAGTATAGCAAGTGCCTAGAGAATACCCTTAAAGAATTGGTTGGTGAAGATGCCTCAGAAAGTATCATCATTGAGCATTCCAATGATGGTTCAGGAATTGGTGCTGCCCTACTTGCAGCCTCACTGTCCCAGTAA 1476 0.4512 MRKVVLCATVIGAATACAVGAVAVQRYVRKCRRWGRALEILQELEEKCATPTWKLKRIADAMNVEMHAGLASEGGSKLKMLITYVDKLPTGNEEGLYYAVDLGGTNFRVLRVQLGGKEGGIVSQEFTEVSIPPDLMVGTSTALFDYIAAEVGKFVAQESEDFKVPPGRQREIGFTFSFPVMQTLIASGNLIKWTKGFNIEDAVGKDVVEELMKAIRKQGLXMRVNALVNDTVGTLAGGRYTHKNVIAAIILGTGTNAAYVERVQAIPKWHGPLPDSGEMVINMEWGNFRSSYLPLTEYDHALDAESLNPGEQIFEKIISGMYLGEIVRKVLCKMAEEALLFGDNVPPKLKDPFIFRTPDMSAMHHDSSADLNVVGSKLKNIFEISDSSLEVRKVVVEICNIIATRGARLAAAGILGILKKMGKDNMSDVNGEKNVIAMDGGLYEHYTEYSKCLENTLKELVGEDASESIIIEHSNDGSGIGAALLAASLSQ* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0189 491 PANTHER HEXOKINASE 1 491 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Vra9g0189 491 Gene3D - 61 475 - -
Vra9g0189 491 SUPERFAMILY Actin-like ATPase domain 245 488 IPR043129 -
Vra9g0189 491 Pfam Hexokinase 247 487 IPR022673 GO:0005524|GO:0005975|GO:0016773
Vra9g0189 491 PANTHER HEXOKINASE-1 1 491 - -
Vra9g0189 491 Pfam Hexokinase 41 240 IPR022672 GO:0005524|GO:0005975|GO:0016773
Vra9g0189 491 ProSiteProfiles Hexokinase domain profile. 35 487 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Vra9g0189 491 CDD NBD_sugar-kinase_HSP70_actin 99 261 - -
Vra9g0189 491 PRINTS Hexokinase family signature 98 114 - -
Vra9g0189 491 PRINTS Hexokinase family signature 172 197 - -
Vra9g0189 491 PRINTS Hexokinase family signature 224 240 - -
Vra9g0189 491 PRINTS Hexokinase family signature 247 261 - -
Vra9g0189 491 PRINTS Hexokinase family signature 312 334 - -
Vra9g0189 491 PRINTS Hexokinase family signature 395 417 - -
Vra9g0189 491 PRINTS Hexokinase family signature 472 488 - -
Vra9g0189 491 SUPERFAMILY Actin-like ATPase domain 27 242 IPR043129 -
Vra9g0189 491 Gene3D - 83 486 - -
Vra9g0189 491 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0189 Vra-Chr9 1318729 1323324 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0189 K00844 - gmx:100783775 796.193