Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0180 ATGGATACATCAACATTAACTGAACAACCATTTCTCAAGCTCTCTTCAGATGAGATGTTGGAATTGGAAAGAATATACAAAGATATGGGAGAAAAACCACTTGATTGGAAGTTGTGTCAGGAGATTGCTAGACGTTTTAGTTCCTTGTCAAATGGTGCTGGTAAAACTTCCTTATCAGGACAACAGGTGGAGCAGTGGTTCAAAAATAGGCAGAGAGCATCCCAGAACAAAGATAGTTCATCACCCAACCTGGTGTCACTTTCTGCAGGTCTTTCAAGTTCAAAAGATATATCGGACTTGGCATTTGAAGCAAGATCTACAAAAGATATTGCATGGCATGATGTTGCATTGTTCCTTAACTACAGAGTTATGTGCTCAGGTGAACTTGAAGTCCGTGTCCGATATGCTGGATTTAGTAAAGAGCAGGATGAGTGGGTGAATGTGAAACAGGGGGTGCGTGTGAGATCTATACCATTAGCTCCTTCAGAGTGTCAAAAGCTTCAGGATGGAAATCTTATACTATGTTTCTTGGAAAGAGACGACTATGCTCTCTATTGTGATGCTCGAATTGTGAAAATCCAGAGGAGGGTGCATGATCCAACAGAGTGCACATGCACCTTCATTATTCAATATCTCCATGACCAGACTGAGGAAGAAGTTTCTTGGAACAGGTTATGCATTAGGCCTACAGAAGAAGAATCTGCTGTTCACCCAATTCTTGCCATTGATCCCACCCAAAGTCCTTCTCCTAGTTTCTCCCTAAATCCCATAGAGTCCTTGTGGGGATAA 789 0.4183 MDTSTLTEQPFLKLSSDEMLELERIYKDMGEKPLDWKLCQEIARRFSSLSNGAGKTSLSGQQVEQWFKNRQRASQNKDSSSPNLVSLSAGLSSSKDISDLAFEARSTKDIAWHDVALFLNYRVMCSGELEVRVRYAGFSKEQDEWVNVKQGVRVRSIPLAPSECQKLQDGNLILCFLERDDYALYCDARIVKIQRRVHDPTECTCTFIIQYLHDQTEEEVSWNRLCIRPTEEESAVHPILAIDPTQSPSPSFSLNPIESLWG* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0180 262 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 1 232 - -
Vra9g0180 262 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 232 IPR039276 -
Vra9g0180 262 MobiDBLite consensus disorder prediction 244 262 - -
Vra9g0180 262 Gene3D - 159 231 - -
Vra9g0180 262 Gene3D - 97 158 - -
Vra9g0180 262 Pfam SAWADEE domain 99 226 IPR032001 GO:0003682
Vra9g0180 262 MobiDBLite consensus disorder prediction 243 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0180 Vra-Chr9 1246529 1251103 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0180 - - gmx:100800332 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0180 9 1246529 1251103 Vra9g0180 9 1246529 1251103 ECH