Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0173 ATGGTGAGTGACCAAAGAATAGCAGAGGAGACCCTGCAGGAGTCCAAGGTGGCTGCTTTGGAGACCAGTGGCACAATGAGCGGACCCCTCGTCGGAGCCGCCACCAGGACCCGCCGCCGCCGGAGGGTGGAGGCTATGCAACTGGTTCTGAGAGGGTTGTGCATGGCCTCCTCTGTTGCTTCAATCTCGCTCATGGTCACTGCTAAGGAATCCAGTTCTGTCAGTATTTATGGCTTTCAATTACCTCTTCACTCCAAATGGTCTTTCTCTGAGTCATACGAGTATCTTGTTGGGGTTTCTGCTGCTGTTGCAGCTCATTCCTTGCTTCAACTACTCATTGGCATGTCCAGATTTCTTAGGACTTCTTCTGTGATACCTTCCAGAAATCATGCATGGCTTATTTTTGCTGGGGATCAGGTATTTGCATATGCATTGATGAGTGCTGGATCTGCTGCATCTGGGGTGACCAATCTGAATCGCAGAGGAATTAGACACACGGCTCTGCCAAATTTTTGCAAGCCTTTGCACAAGTTTTGTGACCATGTTGGGATCTCAATAGCCTTCACTTTCACCAGCTGCTTTTTGCTGGCTACATCTGTTGTCCAAGATGTAATATGGCTCTCCCAACACTGA 633 0.4913 MVSDQRIAEETLQESKVAALETSGTMSGPLVGAATRTRRRRRVEAMQLVLRGLCMASSVASISLMVTAKESSSVSIYGFQLPLHSKWSFSESYEYLVGVSAAVAAHSLLQLLIGMSRFLRTSSVIPSRNHAWLIFAGDQVFAYALMSAGSAASGVTNLNRRGIRHTALPNFCKPLHKFCDHVGISIAFTFTSCFLLATSVVQDVIWLSQH* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0173 210 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 9 209 - -
Vra9g0173 210 Pfam Casparian strip membrane protein domain 41 194 IPR006702 -
Vra9g0173 210 PANTHER CASP-LIKE PROTEIN 3A2 9 209 - -
Vra9g0173 210 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 48 203 IPR006459 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0173 32 210 Miscellaneous Gene Families AT3G16300 49.721 3.21e-55 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0173 - - pvu:PHAVU_010G146500g 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0173 9 1169866 1177420 Vra9g0173 9 1169866 1177420 ECH