Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0168 ATGGCTTCTCACTTCAATCTGCAACATCAACTTTTCAACTACTCATCCGTGGGGCTAGATGTCAGAAAAAGAACAACGGCTTATGCCCTTCAACATGCCAATTCAAATGTGTTAGATGAGAGAAATAATAGTTCTTTGAATAGTGGCATGCTAGTTGGATCTCTGTCTTCATGTTGCACATCCTTCAAGAAGCTCTCATCGTTGGCAGCATCAGCTAAGACTTGTTTTTACGGTTCTGATGATCAAAACAAAGAAGCAGTTGAGTTTACTGATGTTCCATCCAGTAGTGAGGGAATAGAACATAATAGGGTGCATTGTGTTGTGTGGTTATTGCATGAATCTTCTAGGAGCTTTTCCCAGTCAATCAACTCGCTTGGAGTAGCAAGGAGTGGTCCTGCTCTTGCAATGGCTTGGATAGGAAAGGATGTGCGTGAATGGCATAGACGTATGGCTTATGAGGTTGCAGTTTATGCTTTAATGAAAGCAGTAATTGATTTGGAGATATTGCTTTCACATGAACGACTAAATGAATTTTCTCCAGTTAAAGAGATTTTGAGCCCACAAATGAATCAAATGGAAGAGCACATTGAAATTCGGCTGAAAATGAAGCATCCATATTTGGTGCAGTGGTTTAGAGAAACTGAAATGCCGCGTATAGCAGGATATTTTATTCCACTTCTAAAGAAGTGGTCCATGGAATATGCAGGAAGCGGTATTGCAGGAATTATTGTGGCTATAACATGTTGTAGTGCAGTGGTTAAATTTGGCTCCAGACATATCTGCTGCTCCTTACTTGTATTGTCTCTTGAAGATGTTTTGGTCAAGCTTATGGACTTTTCACCCAATCTTGCATATATGGACAAATTACATCAGTTAGCAACTGAGGCGGGATTTGAAAAGTATTTCTTGTACCATTTTGGTGGGAAGGTTTTTCCCAGTGAGAAAACTGAGGACCTAGAGTTTTGGATTGGTTTGGCCTACAAGAAACTATTGAAAGCCTTCGATGAAGAAAGCATCACTTTAAAGAAGCAAAATTTTCAGCAAAAGATACGAGCAGACAGTTTGGCTACATTGGGGCTTTTTACATACCTTGGAAGAAAGACTAGAATGTTTTTGTCAGCAATGGGCATTAAGGATCTTGACGGAGTAGTCAAGGACTTCCTCAGGTACCTGGAATTTGGCATTCTTTTCATTTATCCTGAATTTTCCTCCATCAGTGTGTACCAGTGTTTCATGGAGGTGGTAACAGATGAGATAGGATGGCTTGATTTTTATATGTCCTTTGTTCAAATAAACTGCAAGGAGAAAAGGTCTAAACATAATGCTCGCCAGGCAGAGAAAGAGATAATTTCTTCTGTAGTTTTTACTGTGTGCTATGATGTTTTCTCTGGGTTTGCACACTTCAATCGCTCAACTCAACAATCATTGGACACAGCTTCACGATCATACTTGCTTATTTGGGAATCACTAAATACCATGGATCATGCTGCAATTGACAACCAAACATCATATATGGGAAGTATAAATGGACCCAAGTTACCTCGGGTGTTTGAAGTGCATCAGATGTCACATGATTTAACTACAGAAGGATGTCCAGAGATTAATTTTCGAAACAGTAGTACATTCAAAAAGGCTTCAGTTTCTGCAATCACAAGTAAGAAAACATATGAGAAAGACTCTTGTATTGACAAGTCAAATACTCAGCCTCAAAATTTTATCAAGAGATACATAATCAAATTGGCATCCACAAGTGCAGACATCTGGATGGGTACTGTATTGCTCTTCATAGACATTTCAGTTGCTTTAGAGCTACTTTCTAGGCAAATGCATGGCTGCAAGCCTTCTGGGAGTCAAAGAAAGAGGCTAAACAGAACCTTGTCTGACATAATTGTGCTAATTCCAGTGACAATCTTGATGCTACTTCCTGTAACAGCTGTAGGCCATGCAGCTATTCTGGCAGCAATCAAGAAGTATATGCCGTTCTTGATCCCTTCATCTTATTCTTCAGAGCGCTTGGATGTTGTAAAGCAAATAAAGCAAACTAGAGAGATGGGTGATCAGTTACATTTGGCTCAGTTTGACCTTGAAGATCAACCAGTAACCATTTCTTGA 2112 0.3954 MASHFNLQHQLFNYSSVGLDVRKRTTAYALQHANSNVLDERNNSSLNSGMLVGSLSSCCTSFKKLSSLAASAKTCFYGSDDQNKEAVEFTDVPSSSEGIEHNRVHCVVWLLHESSRSFSQSINSLGVARSGPALAMAWIGKDVREWHRRMAYEVAVYALMKAVIDLEILLSHERLNEFSPVKEILSPQMNQMEEHIEIRLKMKHPYLVQWFRETEMPRIAGYFIPLLKKWSMEYAGSGIAGIIVAITCCSAVVKFGSRHICCSLLVLSLEDVLVKLMDFSPNLAYMDKLHQLATEAGFEKYFLYHFGGKVFPSEKTEDLEFWIGLAYKKLLKAFDEESITLKKQNFQQKIRADSLATLGLFTYLGRKTRMFLSAMGIKDLDGVVKDFLRYLEFGILFIYPEFSSISVYQCFMEVVTDEIGWLDFYMSFVQINCKEKRSKHNARQAEKEIISSVVFTVCYDVFSGFAHFNRSTQQSLDTASRSYLLIWESLNTMDHAAIDNQTSYMGSINGPKLPRVFEVHQMSHDLTTEGCPEINFRNSSTFKKASVSAITSKKTYEKDSCIDKSNTQPQNFIKRYIIKLASTSADIWMGTVLLFIDISVALELLSRQMHGCKPSGSQRKRLNRTLSDIIVLIPVTILMLLPVTAVGHAAILAAIKKYMPFLIPSSYSSERLDVVKQIKQTREMGDQLHLAQFDLEDQPVTIS* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0168 703 PANTHER LETM1 AND EF-HAND DOMAIN-CONTAINING PROTEIN ANON-60DA ISOFORM 1 15 693 - -
Vra9g0168 703 PANTHER LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN 15 693 IPR044202 GO:0005743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0168 Vra-Chr9 1134775 1140650 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0168 582 667 EF-hand Containing Proteins AT3G59820 31.395 2.20e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0168 - - gmx:102668384 1132.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0168 9 1134775 1140650 Vra9g0168 9 1134775 1140650 ECH