Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0167 ATGGAATCGAGTCGAAGAGCAGTGGAGTCGTACTGGCGGTCGCGGTTGATCGATTCAGCTACGTCCGATGAAGATAAAGTCACGCCCGTTTACAAATTGGAGGAAATCAGCGAGCTTTTGCGTTCTTCGCATGTTAGTATTGTGAAGGAGGTTTCGGAGTTTGTCTTAAAACGTTTGGAACATAAAAGCCCAGTTGTGAAACAGAAGGCTTTAAGATTGATAAAGTATGTGGTTGGGAAGTCGGGCGTGGAGTTCAGAAGGGAAATGCAGAGACATTCAGTGGCGGTTCGTCAGTTGTTTCACTACAAGGGACAGTTGGATCCTTTGAAAGGCGATGCACTAAATAAGGCTGTGAGAGATACTGCTCACGAGGCTATCTCTGCCATCTTTTCAGAAGAGAATAGTAAGCCAGCACCCGCTGAAGATCTAAACCGGCGGATACAAGGGTTTGGGAATAAAAACTATGAACCGCCACAGGAAGATAAAAAATCTTTTATCAGTGAGGTTGTTGGTATTGGAAGTGCTTCAATTAAGCAAGGGCTTAATAGCTTAACACAGGGACATTCGCTGATGAAAAATGATCCCGGCAGCTATAAGAGTCCAAATCTTCGAAGATCGTTGACAAATGAAACAGAACATGGTGACAGATATGAACCAATTTCGTATCATAATGAAGCTCAGAGTAGTTTTGGAGGTTCAAAGAATCAATCCTCTGGTCCTTGGAATCAGGATTCAAGAGTAACTAAGACGGAAACATCAAATGGGGATTCTGGTGCAAGTTATGTAGAGAGTAAGACAAGAGAGCATAAGTTGCTGGAGACAATTGTAACTTCAGGAGGTGTTCGCCTGCAACCCACTCGTGATGCAATTCAAGCTTTCCTAGCGGAGGCTGCAAAGTTAGATGCATTGGCTTTATGTCATGCCCTTGAACTGAAGCTTCAATCTCCAATTTGGCAGGTTCGCATGAAAGCTGTTTGTGTCCTTGAGTCCATTCTGAGGAAGAAGGATGATGATAATTTTTCACTGGTGGAATCTTACTTCACTGAAAATAGAGACGTGGTGCTGAGATGTTCTGAATCTCCGCAAGTCTCTTTACGGGAAAGGGCTGCAAAGGTTCTTAGTCTTTTAGGTGGAGGTCAGTCAAACAACTCTGCAATTAATTCAGAGAATGCTGTGAAAACAGAGAATGCTGCTGTTGTGGAGCTGCCTAATTTGATAGACACTGGTGATTCAGATGATTATCATGGAACTGAGGACACTCTAAACAGTGTAACAGATCAAAATATATCAACTTTGACATCCACTCCTCTGGTTGATGATTTATTTGGAGATTTCAGCAGCTCTATTGGGGCTAGTCAAGAAATAAAAAATGATGATGATCCATTTGCTGATGTTTCATTTCACACAAGTGAGAACAAAGAAAATGCTGATGATCTCTTTTCTGGGATGACAGTTGGTAGTGATAAGCAGAGCAATCACTCGAGTCACAGGCAGGGGAATATCGGTGATCCTGAACTTTTTGACATTTTTACTTCCAATTCTGAGCACGGAAACCAGAAGGAGCTTGTCACTGATTTAATGGGTGGTCTATCAATGGATGAAAATACCTCAAGTACGACGCAGAAGGGAGCATCTCCTTCCATGCAATTTGAATCTTTATTTTCAGGCTTAACTAACCATATTCCTGGCAATACTTCAGATGGCAAGTTGAGCTCTCAGCCAATGGGGTTGAATGTAAATCCCATTTTTCCTAATGGTACTCTGCCTTTTAATATGCAACCTGGCTTCATGTTGAACCAAGCTTATTCTTCTCAGCCTCTTAATTACGGTGCCATGGGAACTCTTTTGGCTCAACAGCAATTCTTAGCAACAATGGCTAATTTCCAACACCTTAATAATATCAACATGCGAGATGATGGTGTTGCTCAAATGGCTGGACCGAATGGAAAATCACCCTTGCCAGACATATTTCAACCAAATTTTCAAACTCAAACTCCTAGCTCAATGATCAACACCTCAAGGAAAGAAGAAACTAAAGCATTTGACTTTATCTCTGACCATATGACCTCTGCTCGTGATTCAAGGAGAATGATTTAA 2097 0.4187 MESSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEISELLRSSHVSIVKEVSEFVLKRLEHKSPVVKQKALRLIKYVVGKSGVEFRREMQRHSVAVRQLFHYKGQLDPLKGDALNKAVRDTAHEAISAIFSEENSKPAPAEDLNRRIQGFGNKNYEPPQEDKKSFISEVVGIGSASIKQGLNSLTQGHSLMKNDPGSYKSPNLRRSLTNETEHGDRYEPISYHNEAQSSFGGSKNQSSGPWNQDSRVTKTETSNGDSGASYVESKTREHKLLETIVTSGGVRLQPTRDAIQAFLAEAAKLDALALCHALELKLQSPIWQVRMKAVCVLESILRKKDDDNFSLVESYFTENRDVVLRCSESPQVSLRERAAKVLSLLGGGQSNNSAINSENAVKTENAAVVELPNLIDTGDSDDYHGTEDTLNSVTDQNISTLTSTPLVDDLFGDFSSSIGASQEIKNDDDPFADVSFHTSENKENADDLFSGMTVGSDKQSNHSSHRQGNIGDPELFDIFTSNSEHGNQKELVTDLMGGLSMDENTSSTTQKGASPSMQFESLFSGLTNHIPGNTSDGKLSSQPMGLNVNPIFPNGTLPFNMQPGFMLNQAYSSQPLNYGAMGTLLAQQQFLATMANFQHLNNINMRDDGVAQMAGPNGKSPLPDIFQPNFQTQTPSSMINTSRKEETKAFDFISDHMTSARDSRRMI* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0167 698 Gene3D - 2 139 IPR008942 -
Vra9g0167 698 SUPERFAMILY ARM repeat 36 382 IPR016024 -
Vra9g0167 698 CDD ENTH_like_Tepsin 13 132 IPR035802 -
Vra9g0167 698 Pfam ENTH domain 16 129 IPR013809 -
Vra9g0167 698 SMART VHS_2 13 148 IPR002014 GO:0035091|GO:0043130
Vra9g0167 698 MobiDBLite consensus disorder prediction 225 264 - -
Vra9g0167 698 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Vra9g0167 698 MobiDBLite consensus disorder prediction 225 261 - -
Vra9g0167 698 PANTHER UNCHARACTERIZED 1 691 IPR039273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0167 Vra-Chr9 1129522 1134416 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0167 - - gmx:100790466 1200.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0167 9 1129522 1134416 Vra9g0167 9 1129522 1134416 ECH